Basic Information
Locus ID:
evm.TU.utg000019l.175
Species & Taxonomic ID:
Kandelia candel & 61147
Genome Assembly:
GCA_037832225.1
Description:
WRKY transcription factor
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| PERG.utg000019l | 1302924 | 1306204 | - | evm.TU.utg000019l.175 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.17 | 57,399.34 Da | 59.69 | 58.86 | -0.82 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF03106 | WRKY DNA -binding domain | 411 | 468 | 5.1E-26 | IPR003657 |
| Pfam | PF03106 | WRKY DNA -binding domain | 236 | 292 | 2.4E-26 | IPR003657 |
| SUPERFAMILY | SSF118290 | WRKY DNA-binding domain | 234 | 294 | 9.02E-27 | IPR036576 |
| SUPERFAMILY | SSF118290 | WRKY DNA-binding domain | 402 | 470 | 1.11E-29 | IPR036576 |
| Gene3D | G3DSA:2.20.25.80 | WRKY domain | 223 | 295 | 6.5E-29 | IPR036576 |
| Gene3D | G3DSA:2.20.25.80 | WRKY domain | 395 | 471 | 2.0E-36 | IPR036576 |
| SMART | SM00774 | WRKY_cls | 410 | 469 | 5.8E-40 | IPR003657 |
| SMART | SM00774 | WRKY_cls | 235 | 293 | 1.4E-38 | IPR003657 |
| ProSiteProfiles | PS50811 | WRKY domain profile. | 405 | 470 | 38.468864 | IPR003657 |
| ProSiteProfiles | PS50811 | WRKY domain profile. | 230 | 294 | 24.822235 | IPR003657 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 194 | 214 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 194 | 241 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 326 | 390 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 332 | 350 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 292 | 306 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 215 | 240 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 22 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 285 | 306 | - | - |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G03340.1 | WRKY DNA-binding protein 3. Encodes WRKY DNA-binding protein 3 (WRKY3). | 0 |
| RefSeq | XP_021682281.1 | probable WRKY transcription factor 4 [Hevea brasiliensis] | 0 |
| Q9ZQ70 | Probable WRKY transcription factor 3 OS=Arabidopsis thaliana OX=3702 GN=WRKY3 PE=2 SV=1 | 0 | |
| TrEMBL | A0A2P2LK96 | Uncharacterized protein WRKY transcription factor 06 OS=Rhizophora mucronata OX=61149 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology