Basic Information
Locus ID:
evm.TU.utg000019l.1159
Species & Taxonomic ID:
Kandelia candel & 61147
Genome Assembly:
GCA_037832225.1
Description:
Lysosomal
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| PERG.utg000019l | 11504702 | 11512997 | + | evm.TU.utg000019l.1159 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.98 | 112,685.49 Da | 30.61 | 80.85 | -0.35 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd10810 | GH38N_AMII_LAM_like | 41 | 317 | 7.48836E-178 | - |
| Pfam | PF17677 | Glycosyl hydrolases family 38 C-terminal beta sandwich domain | 896 | 1001 | 1.8E-11 | IPR041147 |
| Pfam | PF09261 | Alpha mannosidase middle domain | 359 | 450 | 6.9E-19 | IPR015341 |
| Pfam | PF07748 | Glycosyl hydrolases family 38 C-terminal domain | 602 | 814 | 1.1E-50 | IPR011682 |
| Pfam | PF01074 | Glycosyl hydrolases family 38 N-terminal domain | 42 | 353 | 1.6E-92 | IPR000602 |
| SUPERFAMILY | SSF74650 | Galactose mutarotase-like | 460 | 1004 | 2.04E-147 | IPR011013 |
| SUPERFAMILY | SSF88688 | Families 57/38 glycoside transferase middle domain | 357 | 451 | 2.78E-25 | IPR028995 |
| SUPERFAMILY | SSF88713 | Glycoside hydrolase/deacetylase | 30 | 354 | 4.45E-110 | IPR011330 |
| Gene3D | G3DSA:2.60.40.1180 | - | 467 | 578 | 2.8E-25 | IPR013780 |
| Gene3D | G3DSA:2.70.98.30 | - | 599 | 862 | 7.4E-99 | - |
| Gene3D | G3DSA:1.20.1270.50 | Glycoside hydrolase family 38, central domain | 322 | 401 | 3.0E-29 | IPR037094 |
| Gene3D | G3DSA:2.60.40.1360 | - | 885 | 1004 | 6.3E-36 | - |
| Gene3D | G3DSA:3.20.110.10 | Glycoside hydrolase 38, N terminal domain | 41 | 321 | 1.0E-120 | IPR027291 |
| Gene3D | G3DSA:1.20.1270.50 | Glycoside hydrolase family 38, central domain | 402 | 454 | 5.8E-19 | IPR037094 |
| SMART | SM00872 | Alpha_mann_mid_2 | 358 | 432 | 2.6E-17 | IPR015341 |
| Coils | Coil | Coil | 943 | 963 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G66150.2 | - | 0 |
| RefSeq | XP_021676963.1 | alpha-mannosidase-like isoform X1 [Hevea brasiliensis] | 0 |
| C0HJB3 | Alpha-mannosidase OS=Canavalia ensiformis OX=3823 PE=1 SV=1 | 0 | |
| TrEMBL | A0A067LFA1 | Alpha-mannosidase OS=Jatropha curcas OX=180498 GN=JCGZ_22737 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology