Basic Information
Locus ID:
evm.TU.utg000018l.925
Species & Taxonomic ID:
Kandelia candel & 61147
Genome Assembly:
GCA_037832225.1
Description:
U-box domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| PERG.utg000018l | 9622780 | 9628744 | - | evm.TU.utg000018l.925 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.10 | 85,403.88 Da | 45.38 | 79.79 | -0.38 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01989 | STK_N | 17 | 164 | 7.3869E-56 | - |
| Pfam | PF00069 | Protein kinase domain | 455 | 688 | 6.4E-39 | IPR000719 |
| Pfam | PF00582 | Universal stress protein family | 25 | 153 | 6.2E-8 | IPR006016 |
| SUPERFAMILY | SSF52402 | Adenine nucleotide alpha hydrolases-like | 27 | 161 | 2.34E-9 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 434 | 712 | 2.83E-68 | IPR011009 |
| Gene3D | G3DSA:3.40.50.620 | HUPs | 17 | 161 | 5.3E-11 | IPR014729 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 527 | 760 | 6.8E-48 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 433 | 526 | 4.6E-24 | - |
| SMART | SM00220 | serkin_6 | 454 | 723 | 2.6E-24 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 454 | 716 | 35.495434 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 572 | 584 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 180 | 228 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 193 | 208 | - | - |
| Coils | Coil | Coil | 322 | 349 | - | - |
| Coils | Coil | Coil | 368 | 402 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G78940.3 | - | 0 |
| RefSeq | XP_021681652.1 | U-box domain-containing protein 52-like [Hevea brasiliensis] | 0 |
| Q8S8S7 | U-box domain-containing protein 34 OS=Arabidopsis thaliana OX=3702 GN=PUB34 PE=3 SV=1 | 0 | |
| TrEMBL | A0A1Q3CFF2 | Pkinase domain-containing protein/Usp domain-containing protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_22256 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology