Basic Information
Locus ID:
evm.TU.utg000018l.421
Species & Taxonomic ID:
Kandelia candel & 61147
Genome Assembly:
GCA_037832225.1
Description:
Jacalin-like lectin domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| PERG.utg000018l | 5501218 | 5521292 | + | evm.TU.utg000018l.421 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.50 | 85,194.70 Da | 35.35 | 75.09 | -0.29 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd09612 | Jacalin | 76 | 206 | 5.69315E-41 | IPR033734 |
| CDD | cd09612 | Jacalin | 253 | 383 | 3.41561E-41 | IPR033734 |
| CDD | cd09612 | Jacalin | 632 | 761 | 3.27382E-26 | IPR033734 |
| CDD | cd09612 | Jacalin | 432 | 559 | 4.68475E-33 | IPR033734 |
| Pfam | PF01419 | Jacalin-like lectin domain | 76 | 207 | 4.1E-31 | IPR001229 |
| Pfam | PF01419 | Jacalin-like lectin domain | 631 | 761 | 1.8E-23 | IPR001229 |
| Pfam | PF01419 | Jacalin-like lectin domain | 253 | 383 | 7.1E-29 | IPR001229 |
| Pfam | PF01419 | Jacalin-like lectin domain | 432 | 559 | 1.2E-24 | IPR001229 |
| SUPERFAMILY | SSF51101 | Mannose-binding lectins | 66 | 207 | 2.75E-41 | IPR036404 |
| SUPERFAMILY | SSF51101 | Mannose-binding lectins | 243 | 382 | 3.92E-41 | IPR036404 |
| SUPERFAMILY | SSF51101 | Mannose-binding lectins | 614 | 760 | 9.68E-35 | IPR036404 |
| SUPERFAMILY | SSF51101 | Mannose-binding lectins | 421 | 559 | 6.28E-33 | IPR036404 |
| Gene3D | G3DSA:2.100.10.30 | - | 609 | 761 | 7.8E-44 | IPR036404 |
| Gene3D | G3DSA:2.100.10.30 | - | 232 | 383 | 1.2E-50 | IPR036404 |
| Gene3D | G3DSA:2.100.10.30 | - | 52 | 205 | 1.7E-52 | IPR036404 |
| Gene3D | G3DSA:2.100.10.30 | - | 408 | 559 | 1.9E-42 | IPR036404 |
| SMART | SM00915 | Jacalin_2 | 432 | 560 | 2.0E-36 | IPR001229 |
| SMART | SM00915 | Jacalin_2 | 625 | 762 | 1.5E-33 | IPR001229 |
| SMART | SM00915 | Jacalin_2 | 76 | 207 | 2.0E-36 | IPR001229 |
| SMART | SM00915 | Jacalin_2 | 253 | 384 | 2.9E-36 | IPR001229 |
| ProSiteProfiles | PS51752 | Jacalin-type lectin domain profile. | 65 | 207 | 48.160133 | IPR001229 |
| ProSiteProfiles | PS51752 | Jacalin-type lectin domain profile. | 421 | 560 | 39.915813 | IPR001229 |
| ProSiteProfiles | PS51752 | Jacalin-type lectin domain profile. | 242 | 384 | 48.629093 | IPR001229 |
| ProSiteProfiles | PS51752 | Jacalin-type lectin domain profile. | 614 | 762 | 40.741184 | IPR001229 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G19715.1 | Mannose-binding lectin superfamily protein. | 0 |
| RefSeq | XP_034931890.1 | uncharacterized protein LOC118062271 [Populus alba] | 0 |
| F4HQX1 | Jacalin-related lectin 3 OS=Arabidopsis thaliana OX=3702 GN=JAL3 PE=2 SV=1 | 0 | |
| TrEMBL | A0A8X7ZT06 | Uncharacterized protein OS=Populus tomentosa OX=118781 GN=POTOM_020031 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology