Basic Information
Locus ID:
evm.TU.utg000016l.891
Species & Taxonomic ID:
Kandelia candel & 61147
Genome Assembly:
GCA_037832225.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| PERG.utg000016l | 7371313 | 7375232 | + | evm.TU.utg000016l.891 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.05 | 109,909.31 Da | 33.58 | 100.51 | -0.08 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 709 | 980 | 3.4E-45 | IPR000719 |
| Pfam | PF00560 | Leucine Rich Repeat | 250 | 272 | 1.6 | IPR001611 |
| Pfam | PF00560 | Leucine Rich Repeat | 299 | 320 | 0.35 | IPR001611 |
| Pfam | PF00560 | Leucine Rich Repeat | 467 | 489 | 0.41 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 491 | 550 | 8.0E-8 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 37 | 76 | 1.7E-5 | IPR013210 |
| Pfam | PF13516 | Leucine Rich repeat | 371 | 383 | 1.2 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 313 | 645 | 1.87E-51 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 709 | 982 | 3.01E-70 | IPR011009 |
| SUPERFAMILY | SSF52047 | RNI-like | 84 | 406 | 1.41E-64 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 288 | 388 | 2.2E-29 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 35 | 192 | 1.2E-42 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 785 | 991 | 1.2E-58 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 389 | 631 | 1.2E-61 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 193 | 287 | 1.5E-30 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 671 | 784 | 4.3E-21 | - |
| SMART | SM00220 | serkin_6 | 707 | 982 | 5.5E-30 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 344 | 368 | 83.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 296 | 319 | 22.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 369 | 391 | 300.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 248 | 272 | 34.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 513 | 537 | 36.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 561 | 585 | 110.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 707 | 990 | 35.551968 | IPR000719 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 370 | 391 | 7.43473 | IPR001611 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 829 | 841 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G20270.1 | Leucine-rich receptor-like protein kinase family protein. Encodes a CLAVATA1-related receptor kinase-like protein required for both shoot and flower meristem function. It has a broad expression pattern and is involved in vascular strand development in the leaf, control of leaf shape, size and symmetry, male gametophyte development and ovule specification and function. | 0 |
| RefSeq | XP_002304615.2 | leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 [Populus trichocarpa] | 0 |
| O65440 | Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 OS=Arabidopsis thaliana OX=3702 GN=BAM3 PE=1 SV=3 | 0 | |
| TrEMBL | B9GYR6 | Protein kinase domain-containing protein OS=Populus trichocarpa OX=3694 GN=POPTR_003G157300 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology