Basic Information
Locus ID:
evm.TU.utg000016l.840
Species & Taxonomic ID:
Kandelia candel & 61147
Genome Assembly:
GCA_037832225.1
Description:
calcium calmodulin-dependent serine threonine-protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| PERG.utg000016l | 6846825 | 6854382 | + | evm.TU.utg000016l.840 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.64 | 104,757.95 Da | 47.50 | 82.93 | -0.36 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00051 | EFh | 808 | 867 | 1.94056E-7 | IPR002048 |
| CDD | cd05117 | STKc_CAMK | 472 | 706 | 1.15993E-100 | - |
| CDD | cd00051 | EFh | 846 | 909 | 1.58838E-12 | IPR002048 |
| Pfam | PF13499 | EF-hand domain pair | 841 | 909 | 6.4E-14 | IPR002048 |
| Pfam | PF03372 | Endonuclease/Exonuclease/phosphatase family | 47 | 434 | 1.8E-10 | IPR005135 |
| Pfam | PF00069 | Protein kinase domain | 472 | 701 | 1.0E-49 | IPR000719 |
| Pfam | PF13202 | EF hand | 810 | 825 | 0.076 | IPR002048 |
| SUPERFAMILY | SSF56219 | DNase I-like | 40 | 447 | 9.9E-72 | IPR036691 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 461 | 720 | 3.24E-66 | IPR011009 |
| SUPERFAMILY | SSF47473 | EF-hand | 752 | 917 | 3.72E-32 | IPR011992 |
| Gene3D | G3DSA:3.60.10.10 | Endonuclease/exonuclease/phosphatase | 38 | 471 | 1.6E-107 | IPR036691 |
| Gene3D | G3DSA:1.10.238.10 | - | 750 | 920 | 3.7E-34 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 545 | 745 | 9.9E-51 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 474 | 544 | 8.4E-12 | - |
| SMART | SM00054 | efh_1 | 883 | 911 | 1.7E-6 | IPR002048 |
| SMART | SM00054 | efh_1 | 805 | 833 | 1.5 | IPR002048 |
| SMART | SM00220 | serkin_6 | 472 | 707 | 3.1E-67 | IPR000719 |
| SMART | SM00054 | efh_1 | 841 | 869 | 0.0045 | IPR002048 |
| SMART | SM00128 | i5p_5 | 40 | 449 | 5.4E-54 | IPR000300 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 879 | 914 | 14.011288 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 837 | 872 | 12.225983 | IPR002048 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 472 | 729 | 36.032524 | IPR000719 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 801 | 836 | 9.101698 | IPR002048 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 892 | 904 | - | IPR018247 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 579 | 591 | - | IPR008271 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 814 | 826 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 850 | 862 | - | IPR018247 |
| PRINTS | PR00450 | Recoverin family signature | 809 | 830 | 4.5E-7 | - |
| PRINTS | PR00450 | Recoverin family signature | 899 | 919 | 4.5E-7 | - |
| PRINTS | PR00450 | Recoverin family signature | 833 | 852 | 4.5E-7 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 181 | 201 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G04980.2 | DNAse I-like superfamily protein. | 0 |
| RefSeq | XP_034929203.1 | calcium and calcium/calmodulin-dependent serine/threonine-protein kinase-like [Populus alba] | 0 |
| A0AAR7 | Calcium and calcium/calmodulin-dependent serine/threonine-protein kinase OS=Lotus japonicus OX=34305 GN=CCAMK PE=1 SV=1 | 0 | |
| TrEMBL | A0A2P2LSH4 | Type I inositol 1 4 5-trisphosphate 5-phosphatase CVP2-like isoform X1 OS=Rhizophora mucronata OX=61149 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Anacardiaceae | Pistacia vera | 1 | pistato.v30168840 |
| Apiaceae | Apium graveolens | 1 | Ag3G02085 |
| Arecaceae | Cocos nucifera | 2 | COCNU_04G005670, COCNU_04G005700 |
| Arecaceae | Phoenix dactylifera | 1 | gene-LOC103709055 |
| Asparagaceae | Asparagus officinalis | 1 | AsparagusV1_02.1301.V1.1 |
| Asteraceae | Flaveria trinervia | 1 | Ftri18G25598 |
| Casuarinaceae | Casuarina equisetifolia | 1 | Ceq08G1578 |
| Casuarinaceae | Casuarina glauca | 1 | Cgl08G1608 |
| Nitrariaceae | Nitraria sibirica | 1 | evm.TU.LG02.1013 |
| Plantaginaceae | Plantago ovata | 2 | Pov_00006959, Pov_00014745 |
| Poaceae | Echinochloa crus-galli | 3 | AH05.1968, BH05.2092, CH05.2164 |
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_5AG0368830, gene-QOZ80_5BG0416380 |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.1HG0069960.1 |
| Poaceae | Lolium multiflorum | 1 | gene-QYE76_013966 |
| Poaceae | Oryza coarctata | 2 | Oco09G012740, Oco10G012820 |
| Poaceae | Oryza sativa | 1 | LOC_Os05g41090.1 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_06G240800 |
| Poaceae | Puccinellia tenuiflora | 2 | Pt_Chr0504440, Pt_Chr0504501 |
| Poaceae | Sporobolus alterniflorus | 2 | Chr18G012590, Chr22G005170 |
| Poaceae | Thinopyrum elongatum | 1 | Tel1E01G495900 |
| Poaceae | Triticum dicoccoides | 2 | gene_TRIDC1AG045650, gene_TRIDC1BG051680 |
| Poaceae | Triticum aestivum | 3 | TraesCS1A02G307200.1, TraesCS1B02G318000.1 ... |
| Poaceae | Zea mays | 2 | Zm00001eb200350_P004, Zm00001eb306730_P002 |
| Poaceae | Zoysia japonica | 1 | nbis-gene-25330 |
| Poaceae | Zoysia macrostachya | 1 | Zma_g28476 |
| Posidoniaceae | Posidonia oceanica | 1 | gene.Posoc01g28890 |
| Rhizophoraceae | Bruguiera sexangula | 1 | evm.TU.Scaffold_1_RagTag.1112 |
| Rhizophoraceae | Carallia pectinifolia | 1 | nbisL1-mrna-6503 |
| Rhizophoraceae | Ceriops tagal | 1 | nbisL1-mrna-20877 |
| Rhizophoraceae | Ceriops zippeliana | 1 | nbisL1-mrna-21100 |
| Rhizophoraceae | Kandelia candel | 1 | evm.TU.utg000016l.840 |
| Rhizophoraceae | Kandelia obovata | 1 | Maker00017089 |
| Rhizophoraceae | Rhizophora apiculata | 3 | nbisL1-mrna-11027, nbisL1-mrna-21129, nbisL1-mrna-21130 |
| Rhizophoraceae | Rhizophora mangle | 1 | nbisL1-mrna-13317 |
| Salicaceae | Populus euphratica | 2 | populus_peu06012, populus_peu19879 |
| Solanaceae | Lycium barbarum | 1 | gene-LOC132645338 |
| Solanaceae | Solanum chilense | 1 | SOLCI001256100 |
| Solanaceae | Solanum pennellii | 1 | gene-LOC107028598 |