Basic Information
Locus ID:
evm.TU.utg000016l.700
Species & Taxonomic ID:
Kandelia candel & 61147
Genome Assembly:
GCA_037832225.1
Short Name:
CPK13
Description:
Calcium-dependent protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| PERG.utg000016l | 5529496 | 5534050 | - | evm.TU.utg000016l.700 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.80 | 59,390.13 Da | 42.91 | 85.13 | -0.38 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00051 | EFh | 431 | 493 | 1.53695E-18 | IPR002048 |
| CDD | cd05117 | STKc_CAMK | 53 | 311 | 7.78154E-133 | - |
| Pfam | PF13499 | EF-hand domain pair | 430 | 493 | 3.6E-15 | IPR002048 |
| Pfam | PF13499 | EF-hand domain pair | 358 | 419 | 1.9E-10 | IPR002048 |
| Pfam | PF00069 | Protein kinase domain | 56 | 312 | 6.4E-73 | IPR000719 |
| SUPERFAMILY | SSF47473 | EF-hand | 341 | 519 | 1.78E-43 | IPR011992 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 41 | 336 | 3.64E-84 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 140 | 320 | 3.3E-60 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 55 | 139 | 7.7E-25 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 321 | 496 | 2.2E-51 | - |
| SMART | SM00054 | efh_1 | 359 | 387 | 4.3E-5 | IPR002048 |
| SMART | SM00054 | efh_1 | 431 | 459 | 6.5E-5 | IPR002048 |
| SMART | SM00054 | efh_1 | 467 | 495 | 6.1E-7 | IPR002048 |
| SMART | SM00054 | efh_1 | 395 | 423 | 0.22 | IPR002048 |
| SMART | SM00220 | serkin_6 | 54 | 312 | 7.2E-95 | IPR000719 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 391 | 426 | 8.655371 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 427 | 462 | 14.42972 | IPR002048 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 54 | 312 | 47.071178 | IPR000719 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 463 | 498 | 14.373928 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 355 | 390 | 15.629221 | IPR002048 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 368 | 380 | - | IPR018247 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 60 | 83 | - | IPR017441 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 440 | 452 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 476 | 488 | - | IPR018247 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 174 | 186 | - | IPR008271 |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G51850.1 | calcium-dependent protein kinase 13. member of Calcium Dependent Protein Kinase | 0 |
| RefSeq | XP_021830318.1 | calcium-dependent protein kinase 13 [Prunus avium] | 0 |
| Q8W4I7 | Calcium-dependent protein kinase 13 OS=Arabidopsis thaliana OX=3702 GN=CPK13 PE=1 SV=2 | 0 | |
| TrEMBL | A0A2P2LN27 | Uncharacterized protein MANES_08G092800 OS=Rhizophora mucronata OX=61149 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology