Basic Information
Locus ID:
evm.TU.utg000016l.511
Species & Taxonomic ID:
Kandelia candel & 61147
Genome Assembly:
GCA_037832225.1
Description:
RING finger and CHY zinc finger domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| PERG.utg000016l | 4100617 | 4104807 | + | evm.TU.utg000016l.511 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.35 | 44,688.63 Da | 60.77 | 56.21 | -0.49 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF14634 | zinc-RING finger domain | 261 | 306 | 7.4E-7 | IPR001841 |
| Pfam | PF05495 | CHY zinc finger | 126 | 207 | 1.6E-16 | IPR008913 |
| Pfam | PF14599 | Zinc-ribbon | 309 | 367 | 9.7E-26 | IPR039512 |
| SUPERFAMILY | SSF161245 | Zinc hairpin stack | 198 | 255 | 4.97E-18 | IPR037275 |
| SUPERFAMILY | SSF161219 | CHY zinc finger-like | 123 | 197 | 6.41E-16 | IPR037274 |
| SUPERFAMILY | SSF57850 | RING/U-box | 259 | 318 | 2.34E-9 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 254 | 325 | 6.4E-11 | IPR013083 |
| Gene3D | G3DSA:2.20.28.10 | - | 333 | 375 | 9.8E-19 | - |
| SMART | SM00184 | ring_2 | 262 | 304 | 3.0E-7 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 262 | 305 | 12.1057 | IPR001841 |
| ProSiteProfiles | PS51266 | Zinc finger CHY-type profile. | 119 | 195 | 25.47604 | IPR008913 |
| ProSiteProfiles | PS51270 | Zinc finger CTCHY-type profile. | 197 | 261 | 33.428928 | IPR017921 |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G22920.1 | CHY-type/CTCHY-type/RING-type Zinc finger protein. | 0 |
| RefSeq | XP_021686331.1 | E3 ubiquitin-protein ligase RZFP34-like [Hevea brasiliensis] | 0 |
| Q9FFB6 | E3 ubiquitin-protein ligase RZFP34 OS=Arabidopsis thaliana OX=3702 GN=RZPF34 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2P2M6H4 | RING finger and CHY zinc finger domain-containing protein 1 OS=Rhizophora mucronata OX=61149 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology