Basic Information
Locus ID:
evm.TU.utg000016l.389
Species & Taxonomic ID:
Kandelia candel & 61147
Genome Assembly:
GCA_037832225.1
Description:
Belongs to the peptidase C19 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| PERG.utg000016l | 3022302 | 3029408 | - | evm.TU.utg000016l.389 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.03 | 103,181.25 Da | 36.12 | 82.40 | -0.39 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd02674 | Peptidase_C19R | 732 | 901 | 5.19891E-52 | - |
| Pfam | PF00443 | Ubiquitin carboxyl-terminal hydrolase | 310 | 900 | 1.2E-80 | IPR001394 |
| SUPERFAMILY | SSF54001 | Cysteine proteinases | 308 | 903 | 5.3E-107 | IPR038765 |
| Gene3D | G3DSA:3.90.70.10 | Cysteine proteinases | 301 | 539 | 5.2E-65 | - |
| Gene3D | G3DSA:3.90.70.10 | Cysteine proteinases | 728 | 904 | 2.4E-54 | - |
| ProSiteProfiles | PS50235 | Ubiquitin specific protease (USP) domain profile. | 310 | 903 | 55.939346 | IPR028889 |
| ProSitePatterns | PS00973 | Ubiquitin specific protease (USP) domain signature 2. | 846 | 863 | - | IPR018200 |
| ProSitePatterns | PS00972 | Ubiquitin specific protease (USP) domain signature 1. | 311 | 326 | - | IPR018200 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G22030.1 | ubiquitin-specific protease 8. | 0 |
| RefSeq | XP_021652404.1 | ubiquitin carboxyl-terminal hydrolase 8-like isoform X1 [Hevea brasiliensis] | 0 |
| Q9C585 | Ubiquitin carboxyl-terminal hydrolase 8 OS=Arabidopsis thaliana OX=3702 GN=UBP8 PE=2 SV=2 | 0 | |
| TrEMBL | A0A2P2M494 | Ubiquitin carboxyl-terminal hydrolase OS=Rhizophora mucronata OX=61149 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology