Basic Information
Locus ID:
evm.TU.utg000016l.385
Species & Taxonomic ID:
Kandelia candel & 61147
Genome Assembly:
GCA_037832225.1
Description:
Lymphoid organ expressed yellow head virus receptor protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| PERG.utg000016l | 3000383 | 3003517 | - | evm.TU.utg000016l.385 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.59 | 51,089.45 Da | 55.65 | 54.62 | -0.89 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF06886 | Targeting protein for Xklp2 (TPX2) domain | 242 | 325 | 2.9E-24 | IPR027329 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 300 | 474 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 29 | 247 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 131 | 150 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 409 | 456 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 328 | 400 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 42 | 86 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 155 | 236 | - | - |
| Coils | Coil | Coil | 257 | 287 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G35880.1 | TPX2 (targeting protein for Xklp2) protein family. | 0 |
| RefSeq | XP_052303990.1 | protein WVD2-like 4 isoform X2 [Populus trichocarpa] | 0 |
| Q9SJ62 | Protein WVD2-like 4 OS=Arabidopsis thaliana OX=3702 GN=WDL4 PE=1 SV=2 | 0 | |
| TrEMBL | A0A2P2LLJ2 | Uncharacterized protein LOC105138210 OS=Rhizophora mucronata OX=61149 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology