Basic Information
Locus ID:
evm.TU.utg000016l.344
Species & Taxonomic ID:
Kandelia candel & 61147
Genome Assembly:
GCA_037832225.1
Description:
belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| PERG.utg000016l | 2677301 | 2679393 | - | evm.TU.utg000016l.344 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.19 | 46,058.55 Da | 32.42 | 84.03 | -0.20 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 136 | 410 | 5.28401E-96 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 134 | 407 | 3.9E-49 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 115 | 412 | 1.5E-78 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 114 | 213 | 5.4E-31 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 214 | 417 | 3.4E-62 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 130 | 416 | 39.848705 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 136 | 167 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 256 | 268 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G17220.2 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_021596973.1 | probable serine/threonine-protein kinase PIX13 [Manihot esculenta] | 0 |
| Q9SII6 | Probable serine/threonine-protein kinase PIX13 OS=Arabidopsis thaliana OX=3702 GN=PIX13 PE=1 SV=2 | 0 | |
| TrEMBL | A0A2C9WFQ5 | Protein kinase domain-containing protein OS=Manihot esculenta OX=3983 GN=MANES_02G203500 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Dunaliellaceae | Dunaliella salina | 1 | Dusal.3031s00001.v1.0 |
| Rhizophoraceae | Bruguiera sexangula | 2 | evm.TU.Scaffold_1_RagTag.1259, evm.TU.Scaffold_1_RagTag.450 |
| Rhizophoraceae | Carallia pectinifolia | 3 | nbisL1-mrna-6343, nbisL1-mrna-7726, nbisL1-mrna-7727 |
| Rhizophoraceae | Ceriops tagal | 1 | nbisL1-mrna-16053 |
| Rhizophoraceae | Ceriops zippeliana | 1 | nbisL1-mrna-5482 |
| Rhizophoraceae | Kandelia candel | 2 | evm.TU.utg000012l.277, evm.TU.utg000016l.344 |
| Rhizophoraceae | Kandelia obovata | 2 | Maker00011415, Maker00016594 |
| Rhizophoraceae | Rhizophora apiculata | 1 | nbisL1-mrna-8519 |
| Rhizophoraceae | Rhizophora mangle | 2 | nbisL1-mrna-13448, nbisL1-mrna-597 |
| Salicaceae | Populus euphratica | 2 | populus_peu05796, populus_peu05798 |