Basic Information
Locus ID:
evm.TU.utg000015l.585
Species & Taxonomic ID:
Kandelia candel & 61147
Genome Assembly:
GCA_037832225.1
Description:
rho GTPase-activating protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| PERG.utg000015l | 6932201 | 6942528 | + | evm.TU.utg000015l.585 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.50 | 105,375.19 Da | 55.84 | 74.37 | -0.67 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00821 | PH | 92 | 191 | 1.49482E-11 | - |
| CDD | cd00159 | RhoGAP | 252 | 389 | 3.68842E-34 | - |
| Pfam | PF00169 | PH domain | 91 | 195 | 3.6E-13 | IPR001849 |
| Pfam | PF00620 | RhoGAP domain | 252 | 396 | 1.1E-31 | IPR000198 |
| Pfam | PF14389 | Leucine-zipper of ternary complex factor MIP1 | 690 | 770 | 2.6E-21 | IPR025757 |
| SUPERFAMILY | SSF48350 | GTPase activation domain, GAP | 252 | 445 | 9.61E-34 | IPR008936 |
| SUPERFAMILY | SSF50729 | PH domain-like | 86 | 196 | 6.58E-18 | - |
| Gene3D | G3DSA:1.10.555.10 | Rho GTPase activation protein | 220 | 444 | 4.2E-41 | IPR008936 |
| Gene3D | G3DSA:2.30.29.30 | - | 81 | 197 | 1.9E-17 | IPR011993 |
| SMART | SM00324 | RhoGAP_3 | 249 | 440 | 1.0E-28 | IPR000198 |
| SMART | SM00233 | PH_update | 90 | 198 | 1.3E-15 | IPR001849 |
| ProSiteProfiles | PS50003 | PH domain profile. | 89 | 196 | 15.6623 | IPR001849 |
| ProSiteProfiles | PS50238 | Rho GTPase-activating proteins domain profile. | 243 | 443 | 29.522007 | IPR000198 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 21 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 484 | 503 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 484 | 500 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 608 | 650 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 529 | 547 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 526 | 579 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 832 | 866 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 611 | 643 | - | - |
| Coils | Coil | Coil | 900 | 927 | - | - |
| Coils | Coil | Coil | 655 | 675 | - | - |
| Coils | Coil | Coil | 680 | 714 | - | - |
| Coils | Coil | Coil | 279 | 299 | - | - |
| Coils | Coil | Coil | 739 | 773 | - | - |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G19390.1 | Rho GTPase activation protein (RhoGAP) with PH domain. Encodes a protein with similarity to REN1, a Rho GTPase activating protein. | 0 |
| RefSeq | XP_021643720.1 | rho GTPase-activating protein 7-like isoform X1 [Hevea brasiliensis] | 0 |
| Q8RWQ4 | Rho GTPase-activating protein 7 OS=Arabidopsis thaliana OX=3702 GN=ROPGAP7 PE=2 SV=1 | 0 | |
| TrEMBL | A0A067LGF7 | Rho GTPase-activating protein 7-like OS=Jatropha curcas OX=180498 GN=JCGZ_22776 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology