Basic Information
Locus ID:
evm.TU.utg000015l.194
Species & Taxonomic ID:
Kandelia candel & 61147
Genome Assembly:
GCA_037832225.1
Description:
Belongs to the TPP enzyme family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| PERG.utg000015l | 2059266 | 2062664 | - | evm.TU.utg000015l.194 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.08 | 63,339.56 Da | 30.51 | 90.68 | -0.04 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd07038 | TPP_PYR_PDC_IPDC_like | 28 | 189 | 4.29547E-91 | - |
| CDD | cd02005 | TPP_PDC_IPDC | 387 | 569 | 6.5114E-85 | - |
| Pfam | PF02776 | Thiamine pyrophosphate enzyme, N-terminal TPP binding domain | 25 | 192 | 2.9E-34 | IPR012001 |
| Pfam | PF02775 | Thiamine pyrophosphate enzyme, C-terminal TPP binding domain | 432 | 557 | 1.4E-14 | IPR011766 |
| Pfam | PF00205 | Thiamine pyrophosphate enzyme, central domain | 222 | 339 | 6.2E-21 | IPR012000 |
| SUPERFAMILY | SSF52518 | Thiamin diphosphate-binding fold (THDP-binding) | 25 | 203 | 7.36E-44 | IPR029061 |
| SUPERFAMILY | SSF52518 | Thiamin diphosphate-binding fold (THDP-binding) | 387 | 581 | 4.83E-42 | IPR029061 |
| SUPERFAMILY | SSF52467 | DHS-like NAD/FAD-binding domain | 211 | 364 | 1.35E-32 | IPR029035 |
| Gene3D | G3DSA:3.40.50.1220 | - | 212 | 374 | 3.9E-41 | - |
| Gene3D | G3DSA:3.40.50.970 | - | 22 | 197 | 4.7E-60 | - |
| Gene3D | G3DSA:3.40.50.970 | - | 380 | 568 | 8.0E-56 | - |
| PIRSF | PIRSF036565 | Pyruvt_ip_decrb | 20 | 581 | 8.8E-209 | IPR012110 |
Gene Ontology
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G33070.1 | Thiamine pyrophosphate dependent pyruvate decarboxylase family protein. | 0 |
| RefSeq | XP_044494952.1 | pyruvate decarboxylase 1 [Mangifera indica] | 0 |
| P51850 | Pyruvate decarboxylase 1 OS=Pisum sativum OX=3888 GN=PDC1 PE=2 SV=1 | 0 | |
| TrEMBL | A0A2P2ISH4 | pyruvate decarboxylase OS=Rhizophora mucronata OX=61149 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology