Basic Information
Locus ID:
evm.TU.utg000013l.400
Species & Taxonomic ID:
Kandelia candel & 61147
Genome Assembly:
GCA_037832225.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| PERG.utg000013l | 5360233 | 5363523 | - | evm.TU.utg000013l.400 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.39 | 88,869.25 Da | 41.48 | 84.23 | -0.17 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd12087 | TM_EGFR-like | 489 | 521 | 0.00299457 | - |
| Pfam | PF00560 | Leucine Rich Repeat | 269 | 290 | 1.4 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 338 | 373 | 1.2E-4 | IPR013210 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 35 | 68 | 9.1E-5 | IPR013210 |
| Pfam | PF12799 | Leucine Rich repeats (2 copies) | 399 | 441 | 1.2E-6 | IPR025875 |
| Pfam | PF00069 | Protein kinase domain | 632 | 744 | 6.2E-8 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 575 | 753 | 1.78E-25 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 55 | 444 | 3.15E-48 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 33 | 332 | 5.8E-75 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 519 | 757 | 2.9E-26 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 335 | 460 | 6.2E-34 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 398 | 421 | 14.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 117 | 140 | 0.057 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 192 | 215 | 380.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 588 | 750 | 0.0014 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 422 | 444 | 75.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 290 | 313 | 270.0 | IPR003591 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 594 | 616 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 788 | 814 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 788 | 822 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 461 | 486 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 462 | 486 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G66150.1 | transmembrane kinase 1. receptor-like transmembrane kinase I (TMK1) | 0 |
| RefSeq | XP_021641290.1 | receptor protein kinase TMK1-like isoform X1 [Hevea brasiliensis] | 0 |
| P43298 | Receptor protein kinase TMK1 OS=Arabidopsis thaliana OX=3702 GN=TMK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2P2L8F0 | Receptor protein kinase OS=Rhizophora mucronata OX=61149 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology