Basic Information
Locus ID:
evm.TU.utg000013l.364
Species & Taxonomic ID:
Kandelia candel & 61147
Genome Assembly:
GCA_037832225.1
Description:
PAPA-1-like conserved region
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| PERG.utg000013l | 4610600 | 4613378 | + | evm.TU.utg000013l.364 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.30 | 59,909.10 Da | 52.51 | 56.52 | -1.06 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF04438 | HIT zinc finger | 497 | 528 | 5.2E-7 | IPR007529 |
| Pfam | PF04795 | PAPA-1-like conserved region | 396 | 480 | 4.5E-20 | IPR006880 |
| SMART | SM01406 | PAPA_1_2 | 396 | 481 | 1.4E-30 | IPR006880 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 134 | 153 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 260 | 289 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 199 | 221 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 189 | 244 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 24 | 49 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 94 | 112 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 260 | 337 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 62 | 80 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 115 | - | - |
| Coils | Coil | Coil | 434 | 454 | - | - |
| Coils | Coil | Coil | 385 | 422 | - | - |
Gene Ontology
Cellular Component:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G56460.1 | HIT zinc finger ;PAPA-1-like conserved region. | 0 |
| RefSeq | XP_043815083.1 | uncharacterized protein LOC110621561 [Manihot esculenta] | 0 |
| TrEMBL | A0A2P2IPX7 | PAPA-1 domain-containing protein OS=Rhizophora mucronata OX=61149 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology