Basic Information
Locus ID:
evm.TU.utg000013l.281
Species & Taxonomic ID:
Kandelia candel & 61147
Genome Assembly:
GCA_037832225.1
Short Name:
WRKY3
Description:
Transcription factor
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| PERG.utg000013l | 2366443 | 2370100 | + | evm.TU.utg000013l.281 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.25 | 57,532.39 Da | 57.59 | 60.64 | -0.69 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF03106 | WRKY DNA -binding domain | 247 | 303 | 4.3E-22 | IPR003657 |
| Pfam | PF03106 | WRKY DNA -binding domain | 420 | 476 | 1.1E-24 | IPR003657 |
| SUPERFAMILY | SSF118290 | WRKY DNA-binding domain | 244 | 305 | 8.63E-24 | IPR036576 |
| SUPERFAMILY | SSF118290 | WRKY DNA-binding domain | 411 | 479 | 3.4E-28 | IPR036576 |
| Gene3D | G3DSA:2.20.25.80 | WRKY domain | 231 | 306 | 6.4E-25 | IPR036576 |
| Gene3D | G3DSA:2.20.25.80 | WRKY domain | 404 | 480 | 4.0E-34 | IPR036576 |
| SMART | SM00774 | WRKY_cls | 419 | 478 | 2.9E-37 | IPR003657 |
| SMART | SM00774 | WRKY_cls | 246 | 304 | 3.0E-32 | IPR003657 |
| ProSiteProfiles | PS50811 | WRKY domain profile. | 241 | 305 | 21.26424 | IPR003657 |
| ProSiteProfiles | PS50811 | WRKY domain profile. | 414 | 479 | 36.919415 | IPR003657 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 209 | 234 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 300 | 388 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 37 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 174 | 193 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 337 | 388 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 48 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 300 | 336 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G13960.1 | WRKY DNA-binding protein 4. Encodes WRKY DNA-binding protein 4 (WRKY4). | 0 |
| RefSeq | XP_021651262.1 | probable WRKY transcription factor 3 isoform X1 [Hevea brasiliensis] | 0 |
| Q9XI90 | Probable WRKY transcription factor 4 OS=Arabidopsis thaliana OX=3702 GN=WRKY4 PE=1 SV=2 | 0 | |
| TrEMBL | A0A2C9VWJ7 | WRKY transcription factor 3 OS=Manihot esculenta OX=3983 GN=MANES_05G106900 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology