Basic Information
Locus ID:
evm.TU.utg000013l.215
Species & Taxonomic ID:
Kandelia candel & 61147
Genome Assembly:
GCA_037832225.1
Description:
BEST Arabidopsis thaliana protein match is
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| PERG.utg000013l | 1753457 | 1758372 | + | evm.TU.utg000013l.215 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.69 | 58,094.50 Da | 52.81 | 75.53 | -0.55 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF04601 | Domain of unknown function (DUF569) | 1 | 144 | 1.1E-61 | IPR007679 |
| Pfam | PF04601 | Domain of unknown function (DUF569) | 222 | 363 | 7.9E-74 | IPR007679 |
| SUPERFAMILY | SSF50405 | Actin-crosslinking proteins | 226 | 368 | 1.7E-25 | IPR008999 |
| SUPERFAMILY | SSF50405 | Actin-crosslinking proteins | 7 | 150 | 3.4E-20 | IPR008999 |
| Gene3D | G3DSA:2.80.10.50 | - | 5 | 146 | 6.5E-15 | - |
| Gene3D | G3DSA:2.80.10.50 | - | 230 | 349 | 6.5E-18 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 374 | 393 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 402 | 421 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 402 | 422 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G27100.1 | Actin cross-linking protein. | 0 |
| RefSeq | XP_017971104.1 | PREDICTED: uncharacterized protein LOC18609298 [Theobroma cacao] | 0 |
| TrEMBL | A0A2P2JPF7 | Uncharacterized protein LOC105116278 OS=Rhizophora mucronata OX=61149 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology