Basic Information
Locus ID:
evm.TU.utg000012l.456
Species & Taxonomic ID:
Kandelia candel & 61147
Genome Assembly:
GCA_037832225.1
Description:
Leucine-rich repeat receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| PERG.utg000012l | 3896878 | 3905217 | + | evm.TU.utg000012l.456 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.43 | 93,798.28 Da | 34.83 | 88.16 | -0.15 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 288 | 347 | 2.0E-6 | IPR001611 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 626 | 709 | 7.9E-15 | IPR001245 |
| SUPERFAMILY | SSF52058 | L domain-like | 43 | 388 | 6.29E-53 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 606 | 808 | 2.6E-37 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 701 | 827 | 5.1E-20 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 182 | 280 | 3.6E-19 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 26 | 181 | 3.1E-39 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 593 | 697 | 8.7E-35 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 281 | 417 | 2.8E-17 | IPR032675 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 622 | 859 | 14.266167 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 628 | 650 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G49760.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_021592399.1 | leucine-rich repeat receptor protein kinase HPCA1 isoform X2 [Manihot esculenta] | 0 |
| Q8GZ99 | Leucine-rich repeat receptor protein kinase HPCA1 OS=Arabidopsis thaliana OX=3702 GN=HPCA1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2P2JI79 | Uncharacterized protein MANES_14G162000 OS=Rhizophora mucronata OX=61149 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology