Basic Information
Locus ID:
evm.TU.utg000012l.169
Species & Taxonomic ID:
Kandelia candel & 61147
Genome Assembly:
GCA_037832225.1
Description:
disease resistance
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| PERG.utg000012l | 1221237 | 1227252 | - | evm.TU.utg000012l.169 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.34 | 94,112.88 Da | 50.01 | 96.50 | -0.25 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00931 | NB-ARC domain | 167 | 290 | 3.7E-19 | IPR002182 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 150 | 315 | 4.16E-22 | IPR027417 |
| SUPERFAMILY | SSF52047 | RNI-like | 290 | 747 | 1.73E-23 | - |
| Gene3D | G3DSA:3.40.50.300 | - | 152 | 291 | 2.3E-23 | IPR027417 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 469 | 801 | 6.1E-13 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 295 | 465 | 3.2E-16 | IPR032675 |
| PRINTS | PR00364 | Disease resistance protein signature | 253 | 267 | 5.0E-12 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 180 | 195 | 5.0E-12 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 653 | 669 | 5.0E-12 | - |
| Coils | Coil | Coil | 28 | 55 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G12280.1 | LRR and NB-ARC domains-containing disease resistance protein. | 0 |
| RefSeq | XP_034930026.1 | probable disease resistance protein At4g27220 [Populus alba] | 0 |
| P60838 | Disease resistance protein SUMM2 OS=Arabidopsis thaliana OX=3702 GN=SUMM2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2P2MMH8 | Putative disease resistance protein At4g27220 OS=Rhizophora mucronata OX=61149 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology