Basic Information
Locus ID:
evm.TU.utg000011l.648
Species & Taxonomic ID:
Kandelia candel & 61147
Genome Assembly:
GCA_037832225.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| PERG.utg000011l | 5028560 | 5032445 | - | evm.TU.utg000011l.648 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.91 | 93,050.50 Da | 41.17 | 93.77 | -0.10 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 684 | 788 | 3.3E-7 | IPR001245 |
| Pfam | PF13855 | Leucine rich repeat | 362 | 422 | 5.7E-9 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 86 | 142 | 5.6E-9 | IPR001611 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 568 | 655 | 1.7E-15 | IPR001245 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 20 | 57 | 2.3E-6 | IPR013210 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 320 | 358 | 0.0011 | IPR013210 |
| SUPERFAMILY | SSF52058 | L domain-like | 46 | 429 | 1.09E-55 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 549 | 798 | 3.09E-49 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 528 | 642 | 3.7E-36 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 321 | 442 | 3.9E-34 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 672 | 809 | 2.1E-25 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 19 | 320 | 5.5E-73 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 107 | 130 | 0.0092 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 84 | 106 | 170.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 181 | 205 | 28.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 409 | 445 | 88.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 385 | 408 | 41.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 565 | 796 | 13.828012 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 571 | 593 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 829 | 864 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G23750.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_034920413.1 | receptor-like kinase TMK4 [Populus alba] | 0 |
| Q9LK43 | Receptor-like kinase TMK4 OS=Arabidopsis thaliana OX=3702 GN=TMK4 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8X8CF03 | Uncharacterized protein OS=Populus tomentosa OX=118781 GN=POTOM_045114 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology