Basic Information
Locus ID:
evm.TU.utg000011l.538
Species & Taxonomic ID:
Kandelia candel & 61147
Genome Assembly:
GCA_037832225.1
Description:
Serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| PERG.utg000011l | 4256571 | 4259801 | + | evm.TU.utg000011l.538 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.54 | 20,725.74 Da | 52.71 | 78.77 | -0.26 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 56 | 138 | 6.8E-17 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 52 | 145 | 9.06E-24 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 55 | 153 | 6.1E-30 | - |
| SMART | SM00220 | serkin_6 | 3 | 156 | 0.0013 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 156 | 15.382752 | IPR000719 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G20470.3 | - | 0 |
| RefSeq | XP_024958793.1 | serine/threonine-protein kinase tricorner-like isoform X3 [Cynara cardunculus var. scolymus] | 0 |
| Q6TGC6 | Serine/threonine-protein kinase CBK1 OS=Pneumocystis carinii OX=4754 GN=CBK1 PE=2 SV=1 | 0 | |
| TrEMBL | A0A0S2YS26 | Serine/threonine kinase (Fragment) OS=Gossypium arboreum OX=29729 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Asparagaceae | Asparagus officinalis | 2 | AsparagusV1_04.2901.V1.1, AsparagusV1_Unassigned.80.V1.1 |
| Malvaceae | Hibiscus hamabo Siebold & Zucc. | 1 | nbisL1-mrna-1263 |
| Nitrariaceae | Nitraria sibirica | 1 | evm.TU.LG07.1587 |
| Poaceae | Zoysia japonica | 1 | nbis-gene-27470 |
| Posidoniaceae | Posidonia oceanica | 2 | gene.Posoc01g00640, gene.Posoc01g35000 |
| Rhizophoraceae | Kandelia candel | 1 | evm.TU.utg000011l.538 |
| Rhizophoraceae | Kandelia obovata | 1 | Maker00007975 |
| Salicaceae | Populus euphratica | 1 | populus_peu21550 |