Basic Information
Locus ID:
evm.TU.utg000011l.177
Species & Taxonomic ID:
Kandelia candel & 61147
Genome Assembly:
GCA_037832225.1
Description:
WRKY transcription factor
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| PERG.utg000011l | 1360000 | 1363492 | - | evm.TU.utg000011l.177 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.73 | 58,428.34 Da | 54.80 | 59.55 | -0.77 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF03106 | WRKY DNA -binding domain | 421 | 477 | 2.6E-25 | IPR003657 |
| Pfam | PF03106 | WRKY DNA -binding domain | 241 | 297 | 3.0E-26 | IPR003657 |
| SUPERFAMILY | SSF118290 | WRKY DNA-binding domain | 238 | 299 | 1.09E-26 | IPR036576 |
| SUPERFAMILY | SSF118290 | WRKY DNA-binding domain | 412 | 480 | 3.92E-29 | IPR036576 |
| Gene3D | G3DSA:2.20.25.80 | WRKY domain | 405 | 481 | 7.7E-36 | IPR036576 |
| Gene3D | G3DSA:2.20.25.80 | WRKY domain | 225 | 300 | 7.5E-29 | IPR036576 |
| SMART | SM00774 | WRKY_cls | 240 | 298 | 4.2E-38 | IPR003657 |
| SMART | SM00774 | WRKY_cls | 420 | 479 | 3.4E-39 | IPR003657 |
| ProSiteProfiles | PS50811 | WRKY domain profile. | 415 | 480 | 38.158974 | IPR003657 |
| ProSiteProfiles | PS50811 | WRKY domain profile. | 235 | 299 | 24.994396 | IPR003657 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 200 | 249 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 486 | 502 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 28 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 18 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 479 | 508 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 378 | 392 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 346 | 360 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 202 | 220 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 340 | 392 | - | - |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G03340.1 | WRKY DNA-binding protein 3. Encodes WRKY DNA-binding protein 3 (WRKY3). | 0 |
| RefSeq | XP_021682281.1 | probable WRKY transcription factor 4 [Hevea brasiliensis] | 0 |
| Q9ZQ70 | Probable WRKY transcription factor 3 OS=Arabidopsis thaliana OX=3702 GN=WRKY3 PE=2 SV=1 | 0 | |
| TrEMBL | A0A2P2LKB2 | Putative WRKY transcription factor 3 OS=Rhizophora mucronata OX=61149 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology