Basic Information
Locus ID:
evm.TU.utg000011l.174
Species & Taxonomic ID:
Kandelia candel & 61147
Genome Assembly:
GCA_037832225.1
Description:
SNF1-related protein kinase catalytic subunit alpha
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| PERG.utg000011l | 1344205 | 1346450 | - | evm.TU.utg000011l.174 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.79 | 22,810.86 Da | 50.83 | 84.65 | -0.38 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14335 | UBA_SnRK1_plant | 7 | 47 | 8.31133E-20 | - |
| Pfam | PF02149 | Kinase associated domain 1 | 155 | 197 | 8.5E-11 | IPR001772 |
| Pfam | PF00627 | UBA/TS-N domain | 8 | 43 | 8.0E-7 | IPR015940 |
| SUPERFAMILY | SSF103243 | KA1-like | 42 | 197 | 7.06E-31 | IPR028375 |
| Gene3D | G3DSA:3.30.310.80 | Kinase associated domain 1, KA1 | 109 | 196 | 7.2E-19 | - |
| Gene3D | G3DSA:1.10.8.10 | - | 2 | 48 | 1.7E-7 | - |
| SMART | SM00165 | uba_6 | 8 | 45 | 1.9E-4 | IPR015940 |
| ProSiteProfiles | PS50030 | Ubiquitin-associated domain (UBA) profile. | 6 | 46 | 13.703554 | IPR015940 |
| ProSiteProfiles | PS50032 | Kinase associated domain 1 (KA1) profile. | 148 | 197 | 15.286974 | IPR001772 |
KEGG Pathway
Pathway:
ko04068 (FoxO signaling pathway)
map04068 (FoxO signaling pathway)
ko04140 (Autophagy - animal)
map04140 (Autophagy - animal)
ko04150 (mTOR signaling pathway)
map04150 (mTOR signaling pathway)
ko04151 (PI3K-Akt signaling pathway)
map04151 (PI3K-Akt signaling pathway)
ko04152 (AMPK signaling pathway)
map04152 (AMPK signaling pathway)
ko04211 (Longevity regulating pathway)
map04211 (Longevity regulating pathway)
ko04213 (Longevity regulating pathway - multiple species)
map04213 (Longevity regulating pathway - multiple species)
ko04371 (Apelin signaling pathway)
map04371 (Apelin signaling pathway)
ko04710 (Circadian rhythm)
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G01090.1 | SNF1 kinase homolog 10. encodes a SNF1-related protein kinase that physically interacts with SCF subunit SKP1/ASK1 and 20S proteosome subunit PAD1. It can also interact with PRL1 DWD-containing protein. Based on in vitro degradation assays and cul4cs and prl1 mutants, there is evidence that AKIN10 is degraded in a proteasome-dependent manner, and that this depends on a CUL4-PRL1 E3 ligase | 0 |
| RefSeq | XP_021682273.1 | SNF1-related protein kinase catalytic subunit alpha KIN10 [Hevea brasiliensis] | 0 |
| Q38997 | SNF1-related protein kinase catalytic subunit alpha KIN10 OS=Arabidopsis thaliana OX=3702 GN=KIN10 PE=1 SV=3 | 0 | |
| TrEMBL | A0A2P2JJP4 | non-specific serine/threonine protein kinase OS=Rhizophora mucronata OX=61149 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Chenopodium album | 1 | gene:ENSEOMG00000011978 |
| Plantaginaceae | Plantago ovata | 1 | Pov_00035472 |
| Poaceae | Triticum dicoccoides | 6 | gene_TRIDC3AG069740, gene_TRIDC3BG078840 ... |
| Poaceae | Triticum aestivum | 1 | TraesCS3D02G491700.1 |
| Poaceae | Zoysia japonica | 2 | nbis-gene-36810, nbis-gene-36814 |
| Rhizophoraceae | Kandelia candel | 1 | evm.TU.utg000011l.174 |