Basic Information
Locus ID:
evm.TU.utg000010l.56
Species & Taxonomic ID:
Kandelia candel & 61147
Genome Assembly:
GCA_037832225.1
Short Name:
CPK30
Description:
Calcium-dependent protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| PERG.utg000010l | 491391 | 494934 | - | evm.TU.utg000010l.56 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.22 | 62,896.27 Da | 37.22 | 83.97 | -0.44 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05117 | STKc_CAMK | 73 | 331 | 5.36137E-137 | - |
| Pfam | PF13499 | EF-hand domain pair | 378 | 439 | 3.4E-11 | IPR002048 |
| Pfam | PF00069 | Protein kinase domain | 76 | 332 | 3.2E-75 | IPR000719 |
| Pfam | PF13499 | EF-hand domain pair | 450 | 513 | 2.1E-14 | IPR002048 |
| SUPERFAMILY | SSF47473 | EF-hand | 360 | 539 | 5.59E-47 | IPR011992 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 55 | 360 | 9.04E-88 | IPR011009 |
| Gene3D | G3DSA:1.10.238.10 | - | 341 | 516 | 2.6E-54 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 75 | 159 | 8.6E-28 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 160 | 340 | 3.4E-61 | - |
| SMART | SM00054 | efh_1 | 487 | 515 | 2.4E-5 | IPR002048 |
| SMART | SM00054 | efh_1 | 415 | 443 | 0.0032 | IPR002048 |
| SMART | SM00054 | efh_1 | 451 | 479 | 4.7E-5 | IPR002048 |
| SMART | SM00220 | serkin_6 | 74 | 332 | 8.1E-100 | IPR000719 |
| SMART | SM00054 | efh_1 | 379 | 407 | 2.8E-7 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 483 | 518 | 13.899706 | IPR002048 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 74 | 332 | 48.738991 | IPR000719 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 375 | 410 | 16.521873 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 447 | 482 | 14.959732 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 411 | 446 | 9.799083 | IPR002048 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 424 | 436 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 496 | 508 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 460 | 472 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 388 | 400 | - | IPR018247 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 80 | 103 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 194 | 206 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 48 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G18890.1 | calcium-dependent protein kinase 1. encodes a calcium-dependent protein kinase whose gene expression is induced by dehydration and high salt. Kinase activity could not be detected in vitro. | 0 |
| RefSeq | XP_021679214.1 | calcium-dependent protein kinase 10-like [Hevea brasiliensis] | 0 |
| Q9M9V8 | Calcium-dependent protein kinase 10 OS=Arabidopsis thaliana OX=3702 GN=CPK10 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2P2L9J9 | Calcium-dependent protein kinase 30 OS=Rhizophora mucronata OX=61149 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology