HalophFGD

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Basic Information
Locus ID: evm.TU.utg000010l.436
Species & Taxonomic ID: Kandelia candel & 61147
Genome Assembly: GCA_037832225.1
Description: receptor-like protein kinase
Maps and Mapping Data
Chromosome Start End Strand ID
PERG.utg000010l 3289403 3291641 + evm.TU.utg000010l.436
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
8.14 39,723.23 Da 50.84 78.22 -0.23
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
Pfam PF13947 Wall-associated receptor kinase galacturonan-binding 31 98 2.3E-16 IPR025287
Gene Ontology
Molecular Function:
GO:0030247 (polysaccharide binding)
Best hit
Source Best Hit ID Description E-value
TAIR AT2G46495.2 - 0
RefSeq XP_021643308.1 rust resistance kinase Lr10-like [Hevea brasiliensis] 0
Swiss-Prot P0CH01 Putative RING-H2 finger protein ATL21A OS=Arabidopsis thaliana OX=3702 GN=ATL21A PE=3 SV=1 0
TrEMBL A0A4U5R2C4 non-specific serine/threonine protein kinase OS=Populus alba OX=43335 GN=D5086_0000014350 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network

No network data available for this species.

Orthology
Family Species Count Orthologous Genes
Acanthaceae Avicennia marina 7 jg10251, jg13896, jg2005, jg23556, jg37312, jg4724, jg4863
Aizoaceae Mesembryanthemum crystallinum 10 gene_16209, gene_16210, gene_2231, gene_23548, gene_3286 ...
gene_3290, gene_3291, gene_3292, gene_3293, gene_3294
Amaranthaceae Atriplex hortensis 8 Ah003873, Ah018649, Ah018655, Ah018658, Ah018666, Ah018667 ...
Ah018677, Ah022861
Amaranthaceae Beta vulgaris 4 BVRB_1g003160, BVRB_3g052260, BVRB_3g052270, BVRB_5g098830
Amaranthaceae Salicornia bigelovii 11 Sbi_jg15109, Sbi_jg15118, Sbi_jg15119, Sbi_jg24032 ...
Sbi_jg3961, Sbi_jg49174, Sbi_jg55943, Sbi_jg55947, Sbi_jg55952, Sbi_jg55953, Sbi_jg7879
Amaranthaceae Salicornia europaea 7 Seu_jg12165, Seu_jg26423, Seu_jg26425, Seu_jg26426 ...
Seu_jg26430, Seu_jg26431, Seu_jg6069
Amaranthaceae Suaeda aralocaspica 10 GOSA_00000576, GOSA_00010640, GOSA_00020030, GOSA_00020031 ...
GOSA_00020033, GOSA_00020036, GOSA_00020038, GOSA_00020040, GOSA_00020041, GOSA_00025367
Amaranthaceae Suaeda glauca 19 Sgl01377, Sgl01385, Sgl01386, Sgl01445, Sgl06451, Sgl06461 ...
Sgl06462, Sgl06532, Sgl06543, Sgl06544, Sgl10915, Sgl16269, Sgl34867, Sgl40264, Sgl52209, Sgl52232, Sgl53358, Sgl57481, Sgl58621
Amaranthaceae Chenopodium album 10 gene:ENSEOMG00000000507, gene:ENSEOMG00000000873 ...
gene:ENSEOMG00000015370, gene:ENSEOMG00000022583, gene:ENSEOMG00000024572, gene:ENSEOMG00000032266, gene:ENSEOMG00000032403, gene:ENSEOMG00000035807, gene:ENSEOMG00000043538, gene:ENSEOMG00000045066
Amaranthaceae Chenopodium quinoa 12 CQ.Regalona.r1.1AG0002100, CQ.Regalona.r1.2BG0026160 ...
CQ.Regalona.r1.3AG0004660, CQ.Regalona.r1.3AG0004710, CQ.Regalona.r1.3AG0004820, CQ.Regalona.r1.3AG0004850, CQ.Regalona.r1.3BG0004780, CQ.Regalona.r1.3BG0004810, CQ.Regalona.r1.3BG0004860, CQ.Regalona.r1.3BG0004900, CQ.Regalona.r1.5AG0005820, CQ.Regalona.r1.5BG0006150
Anacardiaceae Pistacia vera 6 pistato.v30005750, pistato.v30043600, pistato.v30134390 ...
pistato.v30185150, pistato.v30215830, pistato.v30216680
Apiaceae Apium graveolens 5 Ag11G05058, Ag11G05059, Ag6G01552, Ag6G02066, Ag7G01464
Asteraceae Flaveria trinervia 7 Ftri11G17799, Ftri14G08304, Ftri14G29919, Ftri15G01300 ...
Ftri2G17479, Ftri3G21947, Ftri7G05743
Brassicaceae Arabidopsis thaliana 6 AT1G28040.1, AT2G25410.1, AT2G46494.1, AT2G46495.1 ...
AT5G36001.1, AT5G53110.1
Brassicaceae Eutrema salsugineum 3 Thhalv10001500m.g.v1.0, Thhalv10006034m.g.v1.0 ...
Thhalv10013815m.g.v1.0
Brassicaceae Schrenkiella parvula 5 Sp1g24210.v2.2, Sp1g24220.v2.2, Sp4g28500.v2.2 ...
Sp5g01650.v2.2, Sp6g15280.v2.2
Brassicaceae Brassica nigra 8 BniB01g000960.2N, BniB01g000970.2N, BniB01g000980.2N ...
BniB02g031240.2N, BniB05g033040.2N, BniB06g061860.2N, BniB08g075930.2N, BniS06172g270.2N
Casuarinaceae Casuarina equisetifolia 5 Ceq02G1260, Ceq03G0577, Ceq03G0578, Ceq03G0716, Ceq09G1593
Casuarinaceae Casuarina glauca 3 Cgl02G1300, Cgl03G0684, Cgl03G0815
Malvaceae Hibiscus hamabo Siebold & Zucc. 3 nbisL1-mrna-11276, nbisL1-mrna-6155, nbisL1-mrna-9535
Nitrariaceae Nitraria sibirica 5 evm.TU.LG01.2893, evm.TU.LG10.1534, evm.TU.LG10.1537 ...
evm.TU.LG10.1538, evm.TU.LG10.1539
Plantaginaceae Plantago ovata 8 Pov_00004151, Pov_00005380, Pov_00005381, Pov_00005382 ...
Pov_00006892, Pov_00010757, Pov_00020674, Pov_00041137
Plumbaginaceae Limonium bicolor 4 Lb1G03661, Lb4G22028, Lb6G31391, Lb6G31392
Portulacaceae Portulaca oleracea 14 evm.TU.LG01.1526, evm.TU.LG01.1527, evm.TU.LG04.2157 ...
evm.TU.LG04.2158, evm.TU.LG04.3272, evm.TU.LG06.150, evm.TU.LG06.151, evm.TU.LG10.104, evm.TU.LG14.783, evm.TU.LG14.784, evm.TU.LG16.329, evm.TU.LG17.104, evm.TU.LG19.1276, evm.TU.LG24.1275
Rhizophoraceae Bruguiera sexangula 5 evm.TU.Scaffold_14_RagTag.105, evm.TU.Scaffold_14_RagTag.384 ...
evm.TU.Scaffold_16_RagTag.80, evm.TU.Scaffold_2_RagTag.1649, evm.TU.Scaffold_4258_RagTag.1
Rhizophoraceae Carallia pectinifolia 5 nbisL1-mrna-10738, nbisL1-mrna-17971, nbisL1-mrna-18302 ...
nbisL1-mrna-22328, nbisL1-mrna-3558
Rhizophoraceae Ceriops tagal 3 nbisL1-mrna-20135, nbisL1-mrna-2898, nbisL1-mrna-4367
Rhizophoraceae Ceriops zippeliana 2 nbisL1-mrna-20402, nbisL1-mrna-8335
Rhizophoraceae Kandelia candel 5 add.evm.TU.utg000022l.250, evm.TU.utg000007l.134 ...
evm.TU.utg000007l.333, evm.TU.utg000009l.313, evm.TU.utg000010l.436
Rhizophoraceae Kandelia obovata 4 Maker00005977, Maker00009012, Maker00018335, Maker00018602
Rhizophoraceae Rhizophora apiculata 5 nbisL1-mrna-15968, nbisL1-mrna-16167, nbisL1-mrna-17173 ...
nbisL1-mrna-18186, nbisL1-mrna-2743
Rhizophoraceae Rhizophora mangle 4 nbisL1-mrna-10711, nbisL1-mrna-10992, nbisL1-mrna-20499 ...
nbisL1-mrna-6765
Salicaceae Populus euphratica 8 populus_peu03685, populus_peu27566, populus_peu28069 ...
populus_peu28072, populus_peu29505, populus_peu31563, populus_peu33916, populus_peu34533
Solanaceae Lycium barbarum 7 gene-LOC132599973, gene-LOC132599974, gene-LOC132626353 ...
gene-LOC132632061, gene-LOC132634063, gene-LOC132634789, gene-LOC132635153
Solanaceae Solanum chilense 2 SOLCI002563300, SOLCI003475600
Solanaceae Solanum pennellii 7 gene-LOC107012750, gene-LOC107025285, gene-LOC107027193 ...
gene-LOC107028283, gene-LOC107030047, gene-LOC107030693, gene-LOC107031909
Tamaricaceae Reaumuria soongarica 4 STRG.23332_chr05_+, gene_5255, gene_5256, gene_733
Tamaricaceae Tamarix chinensis 6 TC01G3064, TC03G1953, TC06G0101, TC06G2510, TC10G1796 ...
TC10G1797
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.