Basic Information
Locus ID:
evm.TU.utg000010l.265
Species & Taxonomic ID:
Kandelia candel & 61147
Genome Assembly:
GCA_037832225.1
Description:
Cell division cycle
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| PERG.utg000010l | 2041986 | 2043472 | + | evm.TU.utg000010l.265 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.09 | 35,349.59 Da | 37.54 | 89.31 | -0.20 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00200 | WD40 | 26 | 294 | 6.89838E-42 | - |
| Pfam | PF00400 | WD domain, G-beta repeat | 259 | 294 | 0.026 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 121 | 157 | 2.9E-4 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 166 | 205 | 1.4E-4 | IPR001680 |
| Pfam | PF12894 | Anaphase-promoting complex subunit 4 WD40 domain | 32 | 98 | 9.9E-8 | IPR024977 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 14 | 295 | 9.61E-56 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 1 | 299 | 2.4E-98 | IPR015943 |
| SMART | SM00320 | WD40_4 | 208 | 252 | 120.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 255 | 294 | 4.6E-4 | IPR001680 |
| SMART | SM00320 | WD40_4 | 118 | 157 | 3.6E-6 | IPR001680 |
| SMART | SM00320 | WD40_4 | 35 | 74 | 0.15 | IPR001680 |
| SMART | SM00320 | WD40_4 | 77 | 114 | 0.011 | IPR001680 |
| SMART | SM00320 | WD40_4 | 163 | 205 | 5.1E-5 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 262 | 295 | 11.101955 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 262 | 295 | 13.382416 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 125 | 157 | 10.205597 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 42 | 83 | 10.642123 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 125 | 157 | 12.246197 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 170 | 214 | 8.536777 | IPR001680 |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 192 | 206 | - | IPR019775 |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 61 | 75 | - | IPR019775 |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 281 | 295 | - | IPR019775 |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G27570.1 | Transducin/WD40 repeat-like superfamily protein. | 0 |
| RefSeq | XP_021640171.1 | cell division cycle 20.2, cofactor of APC complex-like [Hevea brasiliensis] | 0 |
| Q3E906 | Cell division cycle 20.5, cofactor of APC complex OS=Arabidopsis thaliana OX=3702 GN=CDC20-5 PE=1 SV=3 | 0 | |
| TrEMBL | A0A4U5Q0E5 | ANAPC4_WD40 domain-containing protein OS=Populus alba OX=43335 GN=D5086_0000174250 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology