Basic Information
Locus ID:
evm.TU.utg000009l.719
Species & Taxonomic ID:
Kandelia candel & 61147
Genome Assembly:
GCA_037832225.1
Description:
Belongs to the NPH3 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| PERG.utg000009l | 7594959 | 7598326 | + | evm.TU.utg000009l.719 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.46 | 70,141.24 Da | 40.77 | 95.46 | -0.17 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00651 | BTB/POZ domain | 23 | 115 | 8.5E-5 | IPR000210 |
| Pfam | PF03000 | NPH3 family | 210 | 471 | 6.7E-79 | IPR027356 |
| SUPERFAMILY | SSF54695 | POZ domain | 22 | 116 | 7.06E-14 | IPR011333 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 10 | 120 | 4.7E-9 | IPR011333 |
| ProSiteProfiles | PS51649 | NPH3 domain profile. | 210 | 495 | 79.958038 | IPR027356 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 594 | 630 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 602 | 618 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G14820.1 | Phototropic-responsive NPH3 family protein. A member of the NPY gene family (NPY1/AT4G31820, NPY2/AT2G14820, NPY3/AT5G67440, NPY4/AT2G23050, NPY5/AT4G37590). Involved in auxin-mediated organogenesis. | 0 |
| RefSeq | XP_012093106.1 | BTB/POZ domain-containing protein NPY2 [Jatropha curcas] | 0 |
| O80970 | Phototropic-responsive NPH3 family protein NPY2 OS=Arabidopsis thaliana OX=3702 GN=NPY2 PE=2 SV=1 | 0 | |
| TrEMBL | A0A067LIM6 | NPH3 domain-containing protein OS=Jatropha curcas OX=180498 GN=JCGZ_16313 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology