Basic Information
Locus ID:
evm.TU.utg000009l.600
Species & Taxonomic ID:
Kandelia candel & 61147
Genome Assembly:
GCA_037832225.1
Description:
Lymphoid organ expressed yellow head virus receptor protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| PERG.utg000009l | 6672077 | 6675207 | - | evm.TU.utg000009l.600 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.67 | 54,290.77 Da | 54.31 | 56.70 | -0.89 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF06886 | Targeting protein for Xklp2 (TPX2) domain | 273 | 356 | 2.4E-23 | IPR027329 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 155 | 243 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 106 | 130 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 72 | 90 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 256 | 275 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 350 | 484 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 432 | 446 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 415 | 431 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 131 | 154 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 41 | 56 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 38 | 278 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 359 | 399 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 470 | 484 | - | - |
| Coils | Coil | Coil | 288 | 323 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G35880.1 | TPX2 (targeting protein for Xklp2) protein family. | 0 |
| RefSeq | XP_021657084.1 | protein WVD2-like 4 isoform X6 [Hevea brasiliensis] | 0 |
| Q9SJ62 | Protein WVD2-like 4 OS=Arabidopsis thaliana OX=3702 GN=WDL4 PE=1 SV=2 | 0 | |
| TrEMBL | A0A2P2LLE3 | Uncharacterized protein LOC105138210 OS=Rhizophora mucronata OX=61149 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology