Basic Information
Locus ID:
evm.TU.utg000009l.597
Species & Taxonomic ID:
Kandelia candel & 61147
Genome Assembly:
GCA_037832225.1
Short Name:
CPK20
Description:
calcium-dependent protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| PERG.utg000009l | 6630508 | 6640891 | + | evm.TU.utg000009l.597 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.75 | 124,083.53 Da | 35.25 | 84.17 | -0.36 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00051 | EFh | 596 | 653 | 1.62292E-19 | IPR002048 |
| CDD | cd02605 | HAD_SPP | 708 | 956 | 1.32209E-90 | - |
| CDD | cd05117 | STKc_CAMK | 216 | 473 | 1.73887E-137 | - |
| Pfam | PF08472 | Sucrose-6-phosphate phosphohydrolase C-terminal | 959 | 1091 | 5.2E-52 | IPR013679 |
| Pfam | PF13499 | EF-hand domain pair | 592 | 653 | 7.9E-14 | IPR002048 |
| Pfam | PF13499 | EF-hand domain pair | 522 | 582 | 2.8E-10 | IPR002048 |
| Pfam | PF05116 | Sucrose-6F-phosphate phosphohydrolase | 706 | 958 | 1.0E-99 | IPR006380 |
| Pfam | PF00069 | Protein kinase domain | 216 | 474 | 1.4E-72 | IPR000719 |
| SUPERFAMILY | SSF54427 | NTF2-like | 982 | 1108 | 1.31E-20 | IPR032710 |
| SUPERFAMILY | SSF47473 | EF-hand | 514 | 653 | 6.07E-47 | IPR011992 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 216 | 475 | 4.45E-83 | IPR011009 |
| SUPERFAMILY | SSF56784 | HAD-like | 708 | 920 | 1.36E-25 | IPR036412 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 218 | 301 | 2.0E-27 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 482 | 655 | 1.5E-59 | - |
| Gene3D | G3DSA:3.40.50.1000 | - | 708 | 955 | 1.7E-79 | IPR023214 |
| Gene3D | G3DSA:3.10.450.50 | - | 978 | 1108 | 6.1E-17 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 302 | 478 | 8.9E-58 | - |
| Gene3D | G3DSA:3.90.1070.10 | - | 799 | 869 | 1.7E-79 | - |
| SMART | SM00220 | serkin_6 | 216 | 474 | 9.1E-100 | IPR000719 |
| SMART | SM00054 | efh_1 | 593 | 621 | 0.0025 | IPR002048 |
| SMART | SM00054 | efh_1 | 557 | 585 | 0.0094 | IPR002048 |
| SMART | SM00054 | efh_1 | 521 | 549 | 2.9E-6 | IPR002048 |
| SMART | SM00054 | efh_1 | 627 | 655 | 1.1E-7 | IPR002048 |
| TIGRFAM | TIGR01484 | HAD-SF-IIB: HAD hydrolase, family IIB | 708 | 916 | 8.3E-36 | IPR006379 |
| TIGRFAM | TIGR01485 | SPP_plant-cyano: sucrose phosphatase | 707 | 959 | 7.0E-117 | IPR012847 |
| TIGRFAM | TIGR01482 | SPP-subfamily: sucrose-phosphate phosphatase subfamily | 709 | 954 | 9.0E-72 | - |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 553 | 588 | 10.608049 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 589 | 622 | 10.831213 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 623 | 658 | 14.820255 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 517 | 552 | 16.270815 | IPR002048 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 216 | 474 | 47.777878 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 222 | 249 | - | IPR017441 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 636 | 648 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 566 | 578 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 530 | 542 | - | IPR018247 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 336 | 348 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 25 | 84 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 57 | 73 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 42 | 56 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 170 | 197 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 170 | 184 | - | - |
| SFLD | SFLDF00043 | sucrose-phosphatase | 698 | 959 | 0.0 | - |
| SFLD | SFLDS00003 | Haloacid Dehalogenase | 698 | 959 | 0.0 | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G38910.1 | calcium-dependent protein kinase 20. member of Calcium Dependent Protein Kinase | 0 |
| RefSeq | XP_021650951.1 | calcium-dependent protein kinase 20-like [Hevea brasiliensis] | 0 |
| Q9ZV15 | Calcium-dependent protein kinase 20 OS=Arabidopsis thaliana OX=3702 GN=CPK20 PE=3 SV=1 | 0 | |
| TrEMBL | A0A067KUW4 | Calcium-dependent protein kinase 20-like OS=Jatropha curcas OX=180498 GN=JCGZ_08714 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 3 | jg15170, jg31894, jg3683 |
| Aizoaceae | Mesembryanthemum crystallinum | 2 | gene_11368, gene_2328 |
| Amaranthaceae | Atriplex hortensis | 2 | Ah003047, Ah006581 |
| Amaranthaceae | Beta vulgaris | 1 | BVRB_5g109020 |
| Amaranthaceae | Salicornia bigelovii | 3 | Sbi_jg15809, Sbi_jg36273, Sbi_jg56608 |
| Amaranthaceae | Salicornia europaea | 2 | Seu_jg13808, Seu_jg4334 |
| Amaranthaceae | Suaeda aralocaspica | 2 | GOSA_00027527, GOSA_00028173 |
| Amaranthaceae | Suaeda glauca | 4 | Sgl25353, Sgl30528, Sgl51357, Sgl56605 |
| Amaranthaceae | Chenopodium album | 5 | gene:ENSEOMG00000005562, gene:ENSEOMG00000010287 ... |
| Amaranthaceae | Chenopodium quinoa | 4 | CQ.Regalona.r1.4AG0013220, CQ.Regalona.r1.4BG0015550 ... |
| Anacardiaceae | Pistacia vera | 2 | pistato.v30169090, pistato.v30277000 |
| Apiaceae | Apium graveolens | 3 | Ag2G01604, Ag3G00687, Ag6G01908 |
| Arecaceae | Cocos nucifera | 2 | COCNU_03G000090, COCNU_12G001670 |
| Arecaceae | Phoenix dactylifera | 2 | gene-LOC103707401, gene-LOC103719698 |
| Asparagaceae | Asparagus officinalis | 2 | AsparagusV1_01.2610.V1.1, AsparagusV1_08.3108.V1.1 |
| Asteraceae | Flaveria trinervia | 2 | Ftri12G03520, Ftri17G20005 |
| Brassicaceae | Arabidopsis thaliana | 4 | AT1G51420.1, AT2G35840.1, AT3G52340.1, AT3G54270.1 |
| Brassicaceae | Eutrema salsugineum | 5 | Thhalv10010361m.g.v1.0, Thhalv10010402m.g.v1.0 ... |
| Brassicaceae | Schrenkiella parvula | 4 | Sp1g38100.v2.2, Sp4g18100.v2.2, Sp5g08120.v2.2 ... |
| Brassicaceae | Brassica nigra | 10 | BniB01g008610.2N, BniB01g008650.2N, BniB03g063780.2N ... |
| Casuarinaceae | Casuarina equisetifolia | 2 | Ceq04G1247, Ceq08G1608 |
| Casuarinaceae | Casuarina glauca | 2 | Cgl04G1409, Cgl08G1638 |
| Cymodoceaceae | Cymodocea nodosa | 2 | gene.Cymno01g11890, gene.Cymno06g03370 |
| Dunaliellaceae | Dunaliella salina | 3 | Dusal.0161s00006.v1.0, Dusal.0406s00015.v1.0 ... |
| Hydrocharitaceae | Thalassia testudinum | 1 | gene.Thate02g24910 |
| Malvaceae | Hibiscus hamabo Siebold & Zucc. | 1 | nbisL1-mrna-12622 |
| Nitrariaceae | Nitraria sibirica | 2 | evm.TU.LG01.1860, evm.TU.LG02.1390 |
| Plantaginaceae | Plantago ovata | 1 | Pov_00003640 |
| Plumbaginaceae | Limonium bicolor | 2 | Lb4G23394, Lb6G31526 |
| Poaceae | Echinochloa crus-galli | 12 | AH02.1823, AH03.1536, AH05.768, AH05.769, AH07.3397 ... |
| Poaceae | Eleusine coracana subsp. coracana | 4 | gene-QOZ80_1AG0017250, gene-QOZ80_1BG0066280 ... |
| Poaceae | Hordeum vulgare | 2 | HORVU.MOREX.r3.1HG0020190.1, HORVU.MOREX.r3.5HG0420010.1 |
| Poaceae | Lolium multiflorum | 4 | gene-QYE76_009471, gene-QYE76_042854, gene-QYE76_061283 ... |
| Poaceae | Oryza coarctata | 5 | Oco02G010930, Oco03G002330, Oco04G002230, Oco09G002160 ... |
| Poaceae | Oryza sativa | 3 | LOC_Os01g27880.1, LOC_Os02g05030.1, LOC_Os05g05270.1 |
| Poaceae | Paspalum vaginatum | 3 | gene-BS78_02G385000, gene-BS78_09G041400 ... |
| Poaceae | Puccinellia tenuiflora | 1 | Pt_Chr0303724 |
| Poaceae | Sporobolus alterniflorus | 5 | Chr01G012540, Chr02G018730, Chr05G014950, Chr05G014980 ... |
| Poaceae | Thinopyrum elongatum | 2 | Tel1E01G173800, Tel5E01G007400 |
| Poaceae | Triticum dicoccoides | 3 | gene_TRIDC1AG012620, gene_TRIDC1BG015480 ... |
| Poaceae | Triticum aestivum | 6 | TraesCS1A02G088600.1, TraesCS1B02G107600.1 ... |
| Poaceae | Zea mays | 2 | Zm00001eb351280_P003, Zm00001eb417940_P001 |
| Poaceae | Zoysia japonica | 2 | nbis-gene-36695, nbis-gene-52842 |
| Poaceae | Zoysia macrostachya | 2 | Zma_g25019, Zma_g26413 |
| Portulacaceae | Portulaca oleracea | 4 | evm.TU.LG06.1371, evm.TU.LG11.716, evm.TU.LG18.488 ... |
| Posidoniaceae | Posidonia oceanica | 1 | gene.Posoc03g21870 |
| Rhizophoraceae | Bruguiera sexangula | 2 | evm.TU.Scaffold_1_RagTag.1085, evm.TU.Scaffold_2_RagTag.1084 |
| Rhizophoraceae | Carallia pectinifolia | 2 | nbisL1-mrna-4104, nbisL1-mrna-6523 |
| Rhizophoraceae | Ceriops tagal | 1 | nbisL1-mrna-14682 |
| Rhizophoraceae | Ceriops zippeliana | 1 | nbisL1-mrna-10184 |
| Rhizophoraceae | Kandelia candel | 2 | evm.TU.utg000009l.597, evm.TU.utg000016l.859 |
| Rhizophoraceae | Kandelia obovata | 2 | Maker00005178, Maker00016446 |
| Rhizophoraceae | Rhizophora apiculata | 3 | nbisL1-mrna-11043, nbisL1-mrna-12506, nbisL1-mrna-12507 |
| Rhizophoraceae | Rhizophora mangle | 3 | nbisL1-mrna-13293, nbisL1-mrna-5673, nbisL1-mrna-5674 |
| Salicaceae | Populus euphratica | 3 | populus_peu06028, populus_peu12379, populus_peu26000 |
| Solanaceae | Lycium barbarum | 2 | gene-LOC132607251, gene-LOC132625962 |
| Solanaceae | Solanum chilense | 2 | SOLCI000200100, SOLCI000938400 |
| Solanaceae | Solanum pennellii | 2 | gene-LOC107002529, gene-LOC107009907 |
| Tamaricaceae | Reaumuria soongarica | 1 | gene_1812 |
| Tamaricaceae | Tamarix chinensis | 1 | TC04G2787 |
| Zosteraceae | Zostera marina | 1 | Zosma06g11450.v3.1 |