Basic Information
Locus ID:
evm.TU.utg000009l.545
Species & Taxonomic ID:
Kandelia candel & 61147
Genome Assembly:
GCA_037832225.1
Description:
Serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| PERG.utg000009l | 6194084 | 6198309 | - | evm.TU.utg000009l.545 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.22 | 71,963.82 Da | 44.48 | 83.34 | -0.49 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd08215 | STKc_Nek | 15 | 270 | 1.05082E-133 | - |
| Pfam | PF00069 | Protein kinase domain | 16 | 269 | 5.3E-66 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 13 | 298 | 3.37E-84 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 91 | 276 | 1.0E-56 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 2 | 90 | 3.2E-23 | - |
| SMART | SM00220 | serkin_6 | 16 | 270 | 8.4E-88 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 16 | 270 | 46.943974 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 137 | 149 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 22 | 45 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 295 | 321 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 371 | 423 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 295 | 324 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G20860.1 | NIMA-related kinase 5. Encodes a member of the NIMA-related serine/threonine kinases (Neks) that have been linked to cell-cycle regulation in fungi and mammals. Plant Neks might be involved in plant development processes. | 0 |
| RefSeq | XP_048225548.1 | serine/threonine-protein kinase Nek6 [Ricinus communis] | 0 |
| Q6YY75 | Serine/threonine-protein kinase Nek6 OS=Oryza sativa subsp. japonica OX=39947 GN=NEK6 PE=1 SV=2 | 0 | |
| TrEMBL | A0A251KAV4 | Protein kinase domain-containing protein OS=Manihot esculenta OX=3983 GN=MANES_08G047800 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology