Basic Information
Locus ID:
evm.TU.utg000009l.521
Species & Taxonomic ID:
Kandelia candel & 61147
Genome Assembly:
GCA_037832225.1
Description:
Heat Stress Transcription Factor
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| PERG.utg000009l | 5904316 | 5905985 | + | evm.TU.utg000009l.521 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.92 | 27,693.96 Da | 55.96 | 63.90 | -0.76 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00447 | HSF-type DNA-binding | 23 | 112 | 4.4E-31 | IPR000232 |
| SUPERFAMILY | SSF46785 | Winged helix DNA-binding domain | 19 | 112 | 8.71E-33 | IPR036390 |
| Gene3D | G3DSA:1.10.10.10 | - | 14 | 113 | 1.2E-35 | IPR036388 |
| SMART | SM00415 | hsfneu3 | 19 | 112 | 8.5E-51 | IPR000232 |
| ProSitePatterns | PS00434 | HSF-type DNA-binding domain signature. | 62 | 86 | - | IPR000232 |
| PRINTS | PR00056 | Heat shock factor (HSF) domain signature | 61 | 73 | 1.5E-18 | IPR000232 |
| PRINTS | PR00056 | Heat shock factor (HSF) domain signature | 23 | 46 | 1.5E-18 | IPR000232 |
| PRINTS | PR00056 | Heat shock factor (HSF) domain signature | 74 | 86 | 1.5E-18 | IPR000232 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 138 | 157 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 116 | 161 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 116 | 130 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G41690.1 | heat shock transcription factor B3. member of Heat Stress Transcription Factor (Hsf) family | 0 |
| RefSeq | XP_021646043.1 | heat stress transcription factor B-3-like [Hevea brasiliensis] | 0 |
| O22230 | Heat stress transcription factor B-3 OS=Arabidopsis thaliana OX=3702 GN=HSFB3 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2P2JFG9 | Heat stress transcription factor B-3-like OS=Rhizophora mucronata OX=61149 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology