Basic Information
Locus ID:
evm.TU.utg000009l.172
Species & Taxonomic ID:
Kandelia candel & 61147
Genome Assembly:
GCA_037832225.1
Description:
receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| PERG.utg000009l | 1380142 | 1383018 | - | evm.TU.utg000009l.172 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.22 | 65,823.05 Da | 37.93 | 95.69 | -0.05 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 295 | 553 | 7.5E-46 | IPR000719 |
| Pfam | PF19160 | SPARK | 33 | 179 | 4.4E-13 | IPR043891 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 292 | 559 | 2.7E-69 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 265 | 366 | 9.2E-25 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 368 | 584 | 1.6E-53 | - |
| SMART | SM00220 | serkin_6 | 293 | 564 | 1.2E-29 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 293 | 568 | 35.933586 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 410 | 422 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 571 | 592 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G42960.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_015578671.2 | probable leucine-rich repeat receptor-like protein kinase At5g49770 [Ricinus communis] | 0 |
| Q9SJG2 | Probable receptor-like protein kinase At2g42960 OS=Arabidopsis thaliana OX=3702 GN=At2g42960 PE=3 SV=1 | 0 | |
| TrEMBL | A0A8T2XFU8 | Protein kinase domain-containing protein OS=Populus deltoides OX=3696 GN=H0E87_023417 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 2 | jg14631, jg2706 |
| Anacardiaceae | Pistacia vera | 1 | pistato.v30090070 |
| Apiaceae | Apium graveolens | 1 | Ag5G02894 |
| Arecaceae | Cocos nucifera | 1 | scaffold001322G000030 |
| Arecaceae | Phoenix dactylifera | 1 | gene-LOC103723957 |
| Asparagaceae | Asparagus officinalis | 1 | AsparagusV1_02.1632.V1.1 |
| Asteraceae | Flaveria trinervia | 1 | Ftri9G24805 |
| Casuarinaceae | Casuarina equisetifolia | 1 | Ceq06G2202 |
| Casuarinaceae | Casuarina glauca | 1 | Cgl06G2321 |
| Nitrariaceae | Nitraria sibirica | 1 | evm.TU.LG03.2110 |
| Plantaginaceae | Plantago ovata | 4 | Pov_00033052, Pov_00038843, Pov_00038844, Pov_00038845 |
| Poaceae | Echinochloa crus-galli | 3 | AH02.2964, BH02.3047, CH02.3477 |
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_9AG0681750, gene-QOZ80_9BG0706520 |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.6HG0591020.1 |
| Poaceae | Lolium multiflorum | 1 | gene-QYE76_021051 |
| Poaceae | Oryza coarctata | 2 | Oco21G005140, Oco22G006190 |
| Poaceae | Oryza sativa | 1 | LOC_Os11g26140.1 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_05G135500 |
| Poaceae | Puccinellia tenuiflora | 1 | Pt_Chr0202315 |
| Poaceae | Thinopyrum elongatum | 1 | Tel6E01G410400 |
| Poaceae | Triticum dicoccoides | 2 | gene_TRIDC6AG032390, gene_TRIDC6BG038750 |
| Poaceae | Triticum aestivum | 3 | TraesCS6A02G209100.1, TraesCS6B02G238100.1 ... |
| Poaceae | Zea mays | 1 | Zm00001eb094200_P001 |
| Poaceae | Zoysia japonica | 1 | nbis-gene-38699 |
| Poaceae | Zoysia macrostachya | 1 | Zma_g18763 |
| Rhizophoraceae | Bruguiera sexangula | 1 | evm.TU.Scaffold_2_RagTag.1866 |
| Rhizophoraceae | Carallia pectinifolia | 3 | nbisL1-mrna-3250, nbisL1-mrna-7806, nbisL1-mrna-7807 |
| Rhizophoraceae | Ceriops tagal | 2 | nbisL1-mrna-16103, nbisL1-mrna-8416 |
| Rhizophoraceae | Ceriops zippeliana | 3 | nbisL1-mrna-13843, nbisL1-mrna-5418, nbisL1-mrna-5419 |
| Rhizophoraceae | Kandelia candel | 1 | evm.TU.utg000009l.172 |
| Rhizophoraceae | Kandelia obovata | 1 | Maker00005406 |
| Rhizophoraceae | Rhizophora mangle | 1 | nbisL1-mrna-16318 |
| Salicaceae | Populus euphratica | 4 | populus_peu16027, populus_peu19429, populus_peu19443 ... |
| Solanaceae | Lycium barbarum | 1 | gene-LOC132612938 |
| Solanaceae | Solanum pennellii | 2 | gene-LOC107016837, gene-LOC114076832 |