Basic Information
Locus ID:
evm.TU.utg000008l.819
Species & Taxonomic ID:
Kandelia candel & 61147
Genome Assembly:
GCA_037832225.1
Description:
PB1 domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| PERG.utg000008l | 8260378 | 8267384 | - | evm.TU.utg000008l.819 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.91 | 152,983.64 Da | 49.16 | 76.53 | -0.56 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd13999 | STKc_MAP3K-like | 1052 | 1309 | 7.18001E-112 | - |
| CDD | cd06410 | PB1_UP2 | 190 | 285 | 4.63082E-42 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 1048 | 1309 | 6.4E-62 | IPR001245 |
| Pfam | PF00564 | PB1 domain | 203 | 285 | 1.8E-19 | IPR000270 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 1038 | 1308 | 1.52E-77 | IPR011009 |
| SUPERFAMILY | SSF54277 | CAD & PB1 domains | 202 | 288 | 3.17E-21 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 205 | 286 | 1.7E-12 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 1039 | 1133 | 1.5E-26 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 1134 | 1354 | 2.4E-54 | - |
| SMART | SM00666 | PB1_new | 201 | 287 | 8.8E-30 | IPR000270 |
| SMART | SM00220 | serkin_6 | 1046 | 1312 | 8.6E-61 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1046 | 1311 | 41.587189 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 1171 | 1183 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 1052 | 1077 | - | IPR017441 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 1236 | 1258 | 1.5E-13 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 1128 | 1141 | 1.5E-13 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 1165 | 1183 | 1.5E-13 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 1280 | 1302 | 1.5E-13 | IPR001245 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 374 | 406 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 420 | 444 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G35050.1 | Protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain. | 0 |
| RefSeq | XP_011018312.1 | PREDICTED: uncharacterized protein LOC105121394 [Populus euphratica] | 0 |
| O64768 | RAF-like serine/threonine-protein kinase 24 OS=Arabidopsis thaliana OX=3702 GN=RAF24 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2P2M006 | Uncharacterized protein LOC105121394 OS=Rhizophora mucronata OX=61149 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology