Basic Information
Locus ID:
evm.TU.utg000008l.781
Species & Taxonomic ID:
Kandelia candel & 61147
Genome Assembly:
GCA_037832225.1
Description:
isoform X1
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| PERG.utg000008l | 7347351 | 7356050 | + | evm.TU.utg000008l.781 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.87 | 102,286.01 Da | 46.60 | 64.11 | -0.96 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF48371 | ARM repeat | 46 | 268 | 4.8E-6 | IPR016024 |
| SUPERFAMILY | SSF63748 | Tudor/PWWP/MBT | 659 | 701 | 2.48E-7 | - |
| Gene3D | G3DSA:2.30.30.140 | - | 649 | 708 | 1.1E-10 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 626 | 658 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 751 | 769 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 352 | 409 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 712 | 940 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 771 | 806 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 583 | 618 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 436 | 465 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 515 | 529 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 323 | 658 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 858 | 897 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 898 | 917 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 545 | 568 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 807 | 824 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 825 | 857 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G31880.2 | 0 | |
| RefSeq | XP_021596484.1 | titin homolog isoform X1 [Manihot esculenta] | 0 |
| Q8GUP3 | Sister chromatid cohesion protein PDS5 homolog C OS=Arabidopsis thaliana OX=3702 GN=PDS5C PE=1 SV=1 | 0 | |
| TrEMBL | A0A2P2LRH0 | Tudor domain-containing protein OS=Rhizophora mucronata OX=61149 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology