Basic Information
Locus ID:
evm.TU.utg000008l.686
Species & Taxonomic ID:
Kandelia candel & 61147
Genome Assembly:
GCA_037832225.1
Description:
1-phosphatidylinositol-3-phosphate 5-kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| PERG.utg000008l | 5365963 | 5375147 | + | evm.TU.utg000008l.686 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.88 | 199,517.34 Da | 47.24 | 76.33 | -0.42 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd03334 | Fab1_TCP | 354 | 626 | 2.37357E-134 | - |
| CDD | cd17300 | PIPKc_PIKfyve | 1510 | 1773 | 2.16493E-150 | IPR044769 |
| Pfam | PF00118 | TCP-1/cpn60 chaperonin family | 375 | 620 | 3.4E-30 | IPR002423 |
| Pfam | PF01363 | FYVE zinc finger | 2 | 68 | 5.1E-15 | IPR000306 |
| Pfam | PF01504 | Phosphatidylinositol-4-phosphate 5-Kinase | 1549 | 1715 | 4.0E-34 | IPR002498 |
| SUPERFAMILY | SSF56104 | SAICAR synthase-like | 1506 | 1773 | 9.15E-80 | - |
| SUPERFAMILY | SSF52029 | GroEL apical domain-like | 420 | 592 | 1.07E-41 | IPR027409 |
| SUPERFAMILY | SSF57903 | FYVE/PHD zinc finger | 1 | 71 | 2.54E-17 | IPR011011 |
| Gene3D | G3DSA:3.50.7.10 | GroEL | 419 | 592 | 5.3E-53 | IPR027409 |
| Gene3D | G3DSA:3.30.810.10 | - | 1632 | 1774 | 2.2E-42 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 1 | 81 | 3.4E-18 | IPR013083 |
| Gene3D | G3DSA:3.30.800.10 | Phosphatidylinositol Phosphate Kinase II Beta | 1476 | 1630 | 3.4E-36 | IPR027484 |
| SMART | SM00330 | PIPK_2 | 1483 | 1774 | 3.3E-126 | IPR002498 |
| SMART | SM00064 | fyve_4 | 1 | 70 | 1.5E-13 | IPR000306 |
| ProSiteProfiles | PS50178 | Zinc finger FYVE/FYVE-related type profile. | 3 | 69 | 12.917683 | IPR017455 |
| ProSiteProfiles | PS51455 | Phosphatidylinositol phosphate kinase (PIPK) domain profile. | 1448 | 1773 | 58.950447 | IPR002498 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 661 | 685 | - | - |
| Coils | Coil | Coil | 1090 | 1110 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G33240.2 | 1-phosphatidylinositol-4-phosphate 5-kinases;zinc ion binding;1-phosphatidylinositol-3-phosphate 5-kinases. Encodes a protein that is predicted to act as a 1-phosphatidylinositol-3-phosphate (PtdIns3P) 5-kinase based on its homology to Fab1 from yeast. It contains an FYVE domain required for binding to PtdIns3P-containing membranes in yeast, as well as a Cpn60_TCP1 homology domain plus a kinase domain. fab1a/fab1b pollen grains not viable and have defective vacuolar organization. | 0 |
| RefSeq | XP_021642012.1 | 1-phosphatidylinositol-3-phosphate 5-kinase FAB1A-like isoform X1 [Hevea brasiliensis] | 0 |
| Q9LUM0 | 1-phosphatidylinositol-3-phosphate 5-kinase FAB1B OS=Arabidopsis thaliana OX=3702 GN=FAB1B PE=1 SV=1 | 0 | |
| TrEMBL | A0A2P2M4X8 | 1-phosphatidylinositol-3-phosphate 5-kinase OS=Rhizophora mucronata OX=61149 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology