Basic Information
Locus ID:
evm.TU.utg000008l.1378
Species & Taxonomic ID:
Kandelia candel & 61147
Genome Assembly:
GCA_037832225.1
Short Name:
PRK1
Description:
LRR receptor-like serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| PERG.utg000008l | 13131196 | 13133547 | - | evm.TU.utg000008l.1378 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.25 | 72,215.11 Da | 42.36 | 86.44 | -0.28 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 357 | 623 | 9.9E-32 | IPR000719 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 31 | 68 | 2.4E-7 | IPR013210 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 357 | 627 | 3.65E-49 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 33 | 226 | 2.61E-29 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 192 | 231 | 1.9E-6 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 429 | 646 | 3.4E-39 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 28 | 189 | 1.1E-36 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 325 | 428 | 4.5E-18 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 353 | 628 | 27.35425 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 627 | 661 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 292 | 332 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 308 | 332 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 292 | 307 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 235 | 254 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G35390.1 | Leucine-rich repeat protein kinase family protein. Encodes a member of the receptor-like kinase family of genes. In pollen tubes, it accumulates in the plasma membrane of the apical growing tip through the process of exocytosis. | 0 |
| RefSeq | XP_011019962.1 | PREDICTED: probable LRR receptor-like serine/threonine-protein kinase RLK [Populus euphratica] | 0 |
| C0LGU0 | Pollen receptor-like kinase 1 OS=Arabidopsis thaliana OX=3702 GN=PRK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5N5J649 | Protein kinase domain-containing protein OS=Salix brachista OX=2182728 GN=DKX38_028695 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology