Basic Information
Locus ID:
evm.TU.utg000008l.136
Species & Taxonomic ID:
Kandelia candel & 61147
Genome Assembly:
GCA_037832225.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| PERG.utg000008l | 1052050 | 1055828 | + | evm.TU.utg000008l.136 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.41 | 106,998.80 Da | 29.59 | 101.11 | -0.05 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 275 | 334 | 2.2E-7 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 514 | 573 | 3.2E-7 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 346 | 406 | 7.0E-7 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 718 | 806 | 3.7E-14 | IPR000719 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 33 | 78 | 3.8E-4 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 202 | 262 | 2.4E-7 | IPR001611 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 830 | 935 | 5.2E-8 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 718 | 940 | 2.53E-43 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 314 | 623 | 3.23E-54 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 66 | 386 | 2.07E-63 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 195 | 317 | 3.9E-34 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 31 | 194 | 7.2E-40 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 324 | 634 | 1.9E-84 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 709 | 815 | 3.2E-22 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 816 | 948 | 9.2E-28 | - |
| SMART | SM00369 | LRR_typ_2 | 297 | 321 | 8.2 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 201 | 225 | 50.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 273 | 296 | 250.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 560 | 583 | 200.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 441 | 465 | 40.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 345 | 369 | 34.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 129 | 153 | 30.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 715 | 975 | 12.499416 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 721 | 744 | - | IPR017441 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 441 | 454 | 9.9E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 300 | 313 | 9.9E-5 | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G61480.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_034888200.1 | leucine-rich repeat receptor-like protein kinase TDR [Populus alba] | 0 |
| Q9FII5 | Leucine-rich repeat receptor-like protein kinase TDR OS=Arabidopsis thaliana OX=3702 GN=TDR PE=1 SV=1 | 0 | |
| TrEMBL | A0A4U5PUQ2 | Protein kinase domain-containing protein OS=Populus alba OX=43335 GN=D5086_0000176810 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology