Basic Information
Locus ID:
evm.TU.utg000008l.1356
Species & Taxonomic ID:
Kandelia candel & 61147
Genome Assembly:
GCA_037832225.1
Description:
EIN3-binding F-box protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| PERG.utg000008l | 12979041 | 12981566 | - | evm.TU.utg000008l.1356 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.00 | 69,615.21 Da | 42.88 | 103.34 | 0.27 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13516 | Leucine Rich repeat | 547 | 568 | 1.1 | IPR001611 |
| Pfam | PF00646 | F-box domain | 67 | 108 | 0.0012 | IPR001810 |
| Pfam | PF13516 | Leucine Rich repeat | 252 | 275 | 0.0091 | IPR001611 |
| Pfam | PF13516 | Leucine Rich repeat | 227 | 250 | 0.044 | IPR001611 |
| SUPERFAMILY | SSF52047 | RNI-like | 187 | 425 | 1.28E-34 | - |
| SUPERFAMILY | SSF52047 | RNI-like | 309 | 655 | 5.49E-30 | - |
| SUPERFAMILY | SSF81383 | F-box domain | 61 | 105 | 2.09E-6 | IPR036047 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 60 | 301 | 2.3E-30 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 302 | 458 | 2.4E-19 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 459 | 656 | 3.4E-29 | IPR032675 |
| SMART | SM00367 | LRR_CC_2 | 491 | 516 | 0.066 | IPR006553 |
| SMART | SM00256 | fbox_2 | 71 | 112 | 0.0095 | IPR001810 |
| SMART | SM00367 | LRR_CC_2 | 571 | 594 | 190.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 279 | 304 | 1.8E-4 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 253 | 278 | 3.3E-5 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 623 | 648 | 180.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 545 | 570 | 0.03 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 411 | 436 | 120.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 597 | 622 | 210.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 359 | 384 | 7.1 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 201 | 226 | 1.7 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 518 | 543 | 300.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 385 | 410 | 14.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 227 | 252 | 7.9E-6 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 465 | 490 | 10.0 | IPR006553 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G25350.1 | EIN3-binding F box protein 2. Arabidopsis thaliana EIN3-binding F-box protein 2 (EBF2) mRNA. Part of the SCF complex, it is located in the nucleus and is involved in the ethylene-response pathway. | 0 |
| RefSeq | XP_011017769.1 | PREDICTED: EIN3-binding F-box protein 1-like [Populus euphratica] | 0 |
| Q708Y0 | EIN3-binding F-box protein 2 OS=Arabidopsis thaliana OX=3702 GN=EBF2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2P2JKB4 | EIN3-binding F-box protein 1-like OS=Rhizophora mucronata OX=61149 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology