Basic Information
Locus ID:
evm.TU.utg000008l.1342
Species & Taxonomic ID:
Kandelia candel & 61147
Genome Assembly:
GCA_037832225.1
Description:
Ubiquitin system component Cue protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| PERG.utg000008l | 12870335 | 12872592 | - | evm.TU.utg000008l.1342 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.12 | 31,748.20 Da | 66.62 | 76.70 | -0.53 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14279 | CUE | 64 | 98 | 3.7131E-8 | - |
| Pfam | PF02845 | CUE domain | 64 | 101 | 4.8E-6 | IPR003892 |
| SUPERFAMILY | SSF46934 | UBA-like | 57 | 108 | 1.45E-9 | IPR009060 |
| Gene3D | G3DSA:1.10.8.10 | - | 54 | 104 | 6.5E-7 | - |
| ProSiteProfiles | PS51140 | CUE domain profile. | 60 | 103 | 13.742416 | IPR003892 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 26 | 52 | - | - |
| Coils | Coil | Coil | 194 | 214 | - | - |
| Coils | Coil | Coil | 232 | 259 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G32440.1 | Ubiquitin system component Cue protein. | 0 |
| RefSeq | XP_021640758.1 | uncharacterized protein LOC110635647 [Hevea brasiliensis] | 0 |
| TrEMBL | A0A2P2MFR6 | CUE domain-containing protein OS=Rhizophora mucronata OX=61149 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology