Basic Information
Locus ID:
evm.TU.utg000008l.1331
Species & Taxonomic ID:
Kandelia candel & 61147
Genome Assembly:
GCA_037832225.1
Description:
Translocase of chloroplast 90
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| PERG.utg000008l | 12759293 | 12762616 | + | evm.TU.utg000008l.1331 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.53 | 87,461.43 Da | 42.71 | 87.75 | -0.33 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF11886 | Translocase of chloroplast 159/132, membrane anchor domain | 515 | 779 | 8.2E-115 | IPR024283 |
| Pfam | PF04548 | AIG1 family | 170 | 304 | 3.9E-21 | IPR006703 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 163 | 297 | 7.43E-18 | IPR027417 |
| Gene3D | G3DSA:3.40.50.300 | - | 138 | 380 | 3.2E-51 | IPR027417 |
| TIGRFAM | TIGR00993 | 3a0901s04IAP86: chloroplast protein import component Toc86/159, G and M domains | 54 | 779 | 7.3E-209 | IPR005690 |
| ProSiteProfiles | PS51720 | AIG1-type G domain profile. | 166 | 397 | 26.524536 | IPR006703 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 94 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 11 | 35 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 488 | 512 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 54 | 81 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G20300.1 | Avirulence induced gene (AIG1) family protein. | 0 |
| RefSeq | XP_024459909.2 | translocase of chloroplast 90, chloroplastic [Populus trichocarpa] | 0 |
| Q6S5G3 | Translocase of chloroplast 90, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TOC90 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2P2K9C8 | AIG1-type G domain-containing protein OS=Rhizophora mucronata OX=61149 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology