Basic Information
Locus ID:
evm.TU.utg000008l.1247
Species & Taxonomic ID:
Kandelia candel & 61147
Genome Assembly:
GCA_037832225.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| PERG.utg000008l | 12002663 | 12006426 | - | evm.TU.utg000008l.1247 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.07 | 70,150.23 Da | 37.50 | 97.23 | -0.14 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 300 | 566 | 2.5E-42 | IPR001245 |
| Pfam | PF13855 | Leucine rich repeat | 117 | 177 | 7.3E-14 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 27 | 66 | 5.4E-13 | IPR013210 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 278 | 567 | 1.22E-74 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 27 | 191 | 7.29E-38 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 374 | 585 | 1.4E-59 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 26 | 208 | 1.9E-55 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 267 | 373 | 2.8E-35 | - |
| SMART | SM00369 | LRR_typ_2 | 92 | 114 | 320.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 116 | 139 | 2.5 | IPR003591 |
| SMART | SM00220 | serkin_6 | 297 | 566 | 6.1E-32 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 140 | 171 | 45.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 297 | 582 | 34.95834 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 303 | 325 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 416 | 428 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 620 | 643 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G30520.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_021667211.1 | probable LRR receptor-like serine/threonine-protein kinase At2g23950 isoform X3 [Hevea brasiliensis] | 0 |
| Q8VYT3 | Probable LRR receptor-like serine/threonine-protein kinase At4g30520 OS=Arabidopsis thaliana OX=3702 GN=At4g30520 PE=1 SV=1 | 0 | |
| TrEMBL | A0A836IXA8 | Leucine-rich repeat family protein OS=Salix suchowensis OX=1278906 GN=IMY05_006G0143400 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology