Basic Information
Locus ID:
evm.TU.utg000008l.1105
Species & Taxonomic ID:
Kandelia candel & 61147
Genome Assembly:
GCA_037832225.1
Description:
proteinaceous RNase P 1, chloroplastic mitochondrial-like
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| PERG.utg000008l | 10734480 | 10738636 | - | evm.TU.utg000008l.1105 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.14 | 101,879.08 Da | 45.43 | 82.46 | -0.48 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF17177 | Pentacotripeptide-repeat region of PRORP | 218 | 279 | 1.2E-15 | IPR033443 |
| Pfam | PF17177 | Pentacotripeptide-repeat region of PRORP | 404 | 550 | 8.6E-55 | IPR033443 |
| Pfam | PF16953 | Protein-only RNase P | 592 | 816 | 2.1E-72 | IPR031595 |
| Gene3D | G3DSA:3.40.50.11980 | - | 609 | 783 | 1.6E-186 | - |
| Gene3D | G3DSA:1.25.40.10 | Tetratricopeptide repeat domain | 403 | 819 | 1.6E-186 | IPR011990 |
| Gene3D | G3DSA:1.25.40.10 | Tetratricopeptide repeat domain | 227 | 276 | 1.0E-10 | IPR011990 |
| ProSiteProfiles | PS51375 | Pentatricopeptide (PPR) repeat profile. | 463 | 497 | 9.086975 | IPR002885 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 151 | 170 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 151 | 175 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 826 | 844 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 845 | 860 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 826 | 869 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G32230.1 | proteinaceous RNase P 1. RNase P able to cleave tRNA-like structures involved in the maturation of plant mitochondrial mRNAs. | 0 |
| RefSeq | XP_021641394.1 | proteinaceous RNase P 1, chloroplastic/mitochondrial-like isoform X1 [Hevea brasiliensis] | 0 |
| Q66GI4 | Proteinaceous RNase P 1, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PRORP1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2C9W5C1 | ribonuclease P OS=Manihot esculenta OX=3983 GN=MANES_03G022700 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology