Basic Information
Locus ID:
evm.TU.utg000007l.301
Species & Taxonomic ID:
Kandelia candel & 61147
Genome Assembly:
GCA_037832225.1
Description:
ATPase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| PERG.utg000007l | 9488788 | 9493956 | - | evm.TU.utg000007l.301 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.07 | 94,326.46 Da | 44.43 | 87.50 | -0.35 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00009 | AAA | 566 | 699 | 7.52337E-24 | - |
| Pfam | PF17862 | AAA+ lid domain | 722 | 762 | 5.1E-10 | IPR041569 |
| Pfam | PF00004 | ATPase family associated with various cellular activities (AAA) | 568 | 698 | 1.9E-38 | IPR003959 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 528 | 768 | 7.27E-61 | IPR027417 |
| Gene3D | G3DSA:1.10.8.60 | - | 700 | 775 | 5.8E-96 | - |
| Gene3D | G3DSA:3.40.50.300 | - | 527 | 699 | 5.8E-96 | IPR027417 |
| SMART | SM00382 | AAA_5 | 564 | 701 | 2.9E-20 | IPR003593 |
| ProSitePatterns | PS00674 | AAA-protein family signature. | 671 | 690 | - | IPR003960 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G64110.2 | P-loop containing nucleoside triphosphate hydrolases superfamily protein. | 0 |
| RefSeq | XP_021679373.1 | transitional endoplasmic reticulum ATPase homolog 2-like isoform X5 [Hevea brasiliensis] | 0 |
| Q7ZZ25 | Outer mitochondrial transmembrane helix translocase OS=Danio rerio OX=7955 GN=atad1a PE=2 SV=2 | 0 | |
| TrEMBL | A0A2K2BV33 | AAA domain-containing protein OS=Populus trichocarpa OX=3694 GN=POPTR_001G097600 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology