Basic Information
Locus ID:
evm.TU.utg000007l.27
Species & Taxonomic ID:
Kandelia candel & 61147
Genome Assembly:
GCA_037832225.1
Description:
Src homology 3 domains
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| PERG.utg000007l | 5938199 | 5944941 | + | evm.TU.utg000007l.27 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.53 | 45,240.58 Da | 43.83 | 84.49 | -0.49 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF14604 | Variant SH3 domain | 338 | 386 | 7.9E-9 | IPR001452 |
| SUPERFAMILY | SSF50044 | SH3-domain | 335 | 390 | 3.68E-15 | IPR036028 |
| SUPERFAMILY | SSF103657 | BAR/IMD domain-like | 44 | 253 | 1.48E-22 | IPR027267 |
| Gene3D | G3DSA:1.20.1270.60 | Arfaptin homology (AH) domain/BAR domain | 30 | 276 | 5.4E-12 | IPR027267 |
| Gene3D | G3DSA:2.30.30.40 | SH3 Domains | 317 | 397 | 6.8E-15 | - |
| SMART | SM00326 | SH3_2 | 334 | 389 | 1.7E-13 | IPR001452 |
| ProSiteProfiles | PS50002 | Src homology 3 (SH3) domain profile. | 331 | 390 | 20.028643 | IPR001452 |
| Coils | Coil | Coil | 148 | 175 | - | - |
| Coils | Coil | Coil | 1 | 21 | - | - |
| Coils | Coil | Coil | 189 | 223 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G31440.1 | SH3 domain-containing protein. | 0 |
| RefSeq | XP_021662387.1 | SH3 domain-containing protein 1-like [Hevea brasiliensis] | 0 |
| Q9C865 | SH3 domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=SH3P1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A251ITK7 | SH3 domain-containing protein OS=Manihot esculenta OX=3983 GN=MANES_17G005400 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology