Basic Information
Locus ID:
evm.TU.utg000007l.214
Species & Taxonomic ID:
Kandelia candel & 61147
Genome Assembly:
GCA_037832225.1
Description:
Fizzy-related
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| PERG.utg000007l | 8795181 | 8798611 | + | evm.TU.utg000007l.214 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.27 | 52,684.81 Da | 48.68 | 79.50 | -0.32 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00400 | WD domain, G-beta repeat | 292 | 327 | 1.1E-5 | IPR001680 |
| Pfam | PF12894 | Anaphase-promoting complex subunit 4 WD40 domain | 214 | 268 | 3.4E-6 | IPR024977 |
| Pfam | PF00400 | WD domain, G-beta repeat | 332 | 372 | 0.018 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 421 | 457 | 3.2E-5 | IPR001680 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 164 | 464 | 8.55E-60 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 153 | 462 | 1.8E-123 | IPR015943 |
| SMART | SM00320 | WD40_4 | 247 | 284 | 0.15 | IPR001680 |
| SMART | SM00320 | WD40_4 | 204 | 244 | 0.07 | IPR001680 |
| SMART | SM00320 | WD40_4 | 288 | 327 | 2.5E-7 | IPR001680 |
| SMART | SM00320 | WD40_4 | 330 | 372 | 0.0019 | IPR001680 |
| SMART | SM00320 | WD40_4 | 418 | 457 | 2.9E-8 | IPR001680 |
| SMART | SM00320 | WD40_4 | 160 | 201 | 140.0 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 295 | 327 | 10.943775 | - |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 425 | 458 | 11.945589 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 295 | 336 | 13.917108 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 425 | 458 | 14.451798 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 212 | 253 | 9.171722 | IPR001680 |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 444 | 458 | - | IPR019775 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 21 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 19 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G22910.1 | FIZZY-related 2. | 0 |
| RefSeq | XP_021686258.1 | protein FIZZY-RELATED 2-like [Hevea brasiliensis] | 0 |
| Q9M7I2 | B-type cell cycle switch protein ccs52A OS=Medicago truncatula OX=3880 GN=CCS52A PE=1 SV=1 | 0 | |
| TrEMBL | A0A2P2JF06 | Uncharacterized protein MANES_01G069800 OS=Rhizophora mucronata OX=61149 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology