Basic Information
Locus ID:
evm.TU.utg000006l.938
Species & Taxonomic ID:
Kandelia candel & 61147
Genome Assembly:
GCA_037832225.1
Description:
Fasciclin-like arabinogalactan protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| PERG.utg000006l | 9646697 | 9648433 | + | evm.TU.utg000006l.938 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.09 | 41,661.36 Da | 27.39 | 93.81 | 0.02 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02469 | Fasciclin domain | 197 | 326 | 7.6E-12 | IPR000782 |
| Pfam | PF02469 | Fasciclin domain | 36 | 131 | 3.9E-7 | IPR000782 |
| SUPERFAMILY | SSF82153 | FAS1 domain | 191 | 326 | 7.06E-15 | IPR036378 |
| SUPERFAMILY | SSF82153 | FAS1 domain | 32 | 173 | 4.19E-17 | IPR036378 |
| Gene3D | G3DSA:2.30.180.10 | FAS1 domain | 24 | 166 | 9.4E-11 | IPR036378 |
| Gene3D | G3DSA:2.30.180.10 | FAS1 domain | 167 | 327 | 2.2E-9 | IPR036378 |
| SMART | SM00554 | fasc_3 | 223 | 327 | 5.0E-11 | IPR000782 |
| SMART | SM00554 | fasc_3 | 61 | 177 | 1.9 | IPR000782 |
| ProSiteProfiles | PS50213 | FAS1/BIgH3 domain profile. | 25 | 173 | 11.506998 | IPR000782 |
| ProSiteProfiles | PS50213 | FAS1/BIgH3 domain profile. | 185 | 324 | 12.930115 | IPR000782 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 340 | 361 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G12730.1 | FASCICLIN-like arabinogalactan 2. AF333971 Arabidopsis thaliana fasciclin-like arabinogalactan-protein 2 (Fla2) mRNA, complete cds | 0 |
| RefSeq | XP_002534396.3 | fasciclin-like arabinogalactan protein 2 [Ricinus communis] | 0 |
| Q9SU13 | Fasciclin-like arabinogalactan protein 2 OS=Arabidopsis thaliana OX=3702 GN=FLA2 PE=2 SV=1 | 0 | |
| TrEMBL | A0A6A6KWA7 | Fasciclin-like arabinogalactan protein 2 OS=Hevea brasiliensis OX=3981 GN=GH714_023004 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology