Basic Information
Locus ID:
evm.TU.utg000006l.722
Species & Taxonomic ID:
Kandelia candel & 61147
Genome Assembly:
GCA_037832225.1
Description:
disease resistance
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| PERG.utg000006l | 7911345 | 7921886 | + | evm.TU.utg000006l.722 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.21 | 155,973.17 Da | 46.55 | 102.89 | -0.06 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00931 | NB-ARC domain | 160 | 235 | 5.3E-11 | IPR002182 |
| SUPERFAMILY | SSF52058 | L domain-like | 907 | 1097 | 1.36E-7 | - |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 161 | 247 | 5.45E-12 | IPR027417 |
| SUPERFAMILY | SSF52058 | L domain-like | 271 | 586 | 9.52E-16 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 499 | 857 | 4.08E-14 | - |
| SUPERFAMILY | SSF52047 | RNI-like | 1134 | 1366 | 4.47E-14 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 1135 | 1370 | 1.6E-12 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 906 | 1119 | 1.3E-11 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 258 | 398 | 9.8E-7 | IPR032675 |
| Gene3D | G3DSA:3.40.50.300 | - | 139 | 256 | 4.5E-13 | IPR027417 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 400 | 597 | 6.9E-11 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 609 | 878 | 1.2E-5 | IPR032675 |
| PRINTS | PR00364 | Disease resistance protein signature | 432 | 448 | 7.6E-7 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 172 | 187 | 7.6E-7 | - |
| Coils | Coil | Coil | 26 | 50 | - | - |
| Coils | Coil | Coil | 69 | 89 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G12220.1 | Disease resistance protein (CC-NBS-LRR class) family. Resistance gene, mediates resistance against the bacterial pathogen Pseudomonas syringae. Contains a putative nucleotide binding site composed of kinase-1a (or P-loop), kinase-2a, and putative kinase-3a domains, 13 imperfect leucine-rich repeats, a potential leucine zipper, and two uncharacterized motifs that are well conserved in products of previously isolated R genes. Confers resistance to Pseudomonas syringae strains that express avrPphB. | 0 |
| RefSeq | XP_011023525.1 | PREDICTED: uncharacterized protein LOC105124982 [Populus euphratica] | 0 |
| O23317 | Probable disease resistance protein At4g14610 OS=Arabidopsis thaliana OX=3702 GN=At4g14610 PE=3 SV=1 | 0 | |
| TrEMBL | A0A8T2XBS2 | NB-ARC domain-containing protein OS=Populus deltoides OX=3696 GN=H0E87_023210 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology