Basic Information
Locus ID:
evm.TU.utg000006l.311
Species & Taxonomic ID:
Kandelia candel & 61147
Genome Assembly:
GCA_037832225.1
Description:
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| PERG.utg000006l | 2614275 | 2616298 | - | evm.TU.utg000006l.311 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.54 | 19,716.38 Da | 32.21 | 77.37 | -0.04 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G02725.1 | 0 | |
| RefSeq | XP_021612056.1 | uncharacterized protein LOC110614728 [Manihot esculenta] | 0 |
| TrEMBL | A0A2P2JW33 | DUF6737 domain-containing protein OS=Rhizophora mucronata OX=61149 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 1 | jg37860 |
| Aizoaceae | Mesembryanthemum crystallinum | 1 | gene_19414 |
| Amaranthaceae | Atriplex hortensis | 1 | Ah000374 |
| Amaranthaceae | Beta vulgaris | 1 | BVRB_5g119320 |
| Amaranthaceae | Salicornia bigelovii | 3 | Sbi_jg30721, Sbi_jg58542, Sbi_jg58545 |
| Amaranthaceae | Salicornia europaea | 1 | Seu_jg28414 |
| Amaranthaceae | Suaeda aralocaspica | 1 | GOSA_00004977 |
| Amaranthaceae | Suaeda glauca | 2 | Sgl55024, Sgl60279 |
| Amaranthaceae | Chenopodium album | 3 | gene:ENSEOMG00000006882, gene:ENSEOMG00000020893 ... |
| Amaranthaceae | Chenopodium quinoa | 2 | CQ.Regalona.r1.5AG0024850, CQ.Regalona.r1.5BG0026290 |
| Anacardiaceae | Pistacia vera | 1 | pistato.v30027040 |
| Apiaceae | Apium graveolens | 1 | Ag10G00728 |
| Arecaceae | Phoenix dactylifera | 1 | gene-LOC103721442 |
| Asteraceae | Flaveria trinervia | 1 | Ftri9G03715 |
| Brassicaceae | Arabidopsis thaliana | 1 | AT4G02725.1 |
| Brassicaceae | Eutrema salsugineum | 1 | Thhalv10029025m.g.v1.0 |
| Brassicaceae | Schrenkiella parvula | 1 | Sp6g02670.v2.2 |
| Brassicaceae | Brassica nigra | 1 | BniB05g055230.2N |
| Casuarinaceae | Casuarina equisetifolia | 1 | Ceq06G2102 |
| Casuarinaceae | Casuarina glauca | 1 | Cgl06G2217 |
| Cymodoceaceae | Cymodocea nodosa | 1 | gene.Cymno01g02560 |
| Dunaliellaceae | Dunaliella salina | 1 | Dusal.0002s00050.v1.0 |
| Hydrocharitaceae | Thalassia testudinum | 1 | gene.Thate02g37620 |
| Nitrariaceae | Nitraria sibirica | 1 | evm.TU.LG04.1084 |
| Poaceae | Echinochloa crus-galli | 2 | AH01.932, BH01.1063 |
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_3AG0220040, gene-QOZ80_3BG0265260 |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.4HG0335980.1 |
| Poaceae | Lolium multiflorum | 1 | gene-QYE76_062737 |
| Poaceae | Oryza coarctata | 2 | Oco05G021030, Oco06G021880 |
| Poaceae | Oryza sativa | 1 | LOC_Os03g49450.1 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_01G113300 |
| Poaceae | Puccinellia tenuiflora | 1 | Pt_Chr0207452 |
| Poaceae | Sporobolus alterniflorus | 3 | Chr01G007580, Chr04G026460, Chr07G025450 |
| Poaceae | Thinopyrum elongatum | 2 | Tel4E01G072100, Tel5E01G732000 |
| Poaceae | Triticum dicoccoides | 5 | gene_TRIDC3BG045690, gene_TRIDC4AG042730 ... |
| Poaceae | Triticum aestivum | 4 | TraesCS4A02G275200.1, TraesCS4B02G038700.1 ... |
| Poaceae | Zea mays | 1 | Zm00001eb054110_P001 |
| Poaceae | Zoysia macrostachya | 1 | Zma_g699 |
| Portulacaceae | Portulaca oleracea | 2 | evm.TU.LG02.1073, evm.TU.LG09.900 |
| Posidoniaceae | Posidonia oceanica | 1 | gene.Posoc03g05000 |
| Rhizophoraceae | Bruguiera sexangula | 1 | evm.TU.Scaffold_5_RagTag.994 |
| Rhizophoraceae | Carallia pectinifolia | 1 | nbisL1-mrna-11353 |
| Rhizophoraceae | Ceriops tagal | 1 | nbisL1-mrna-18839 |
| Rhizophoraceae | Ceriops zippeliana | 1 | nbisL1-mrna-11608 |
| Rhizophoraceae | Kandelia candel | 1 | evm.TU.utg000006l.311 |
| Rhizophoraceae | Kandelia obovata | 1 | Maker00013364 |
| Rhizophoraceae | Rhizophora apiculata | 1 | nbisL1-mrna-9978 |
| Rhizophoraceae | Rhizophora mangle | 1 | nbisL1-mrna-7612 |
| Salicaceae | Populus euphratica | 1 | populus_peu15050 |
| Solanaceae | Lycium barbarum | 1 | gene-LOC132610934 |
| Solanaceae | Solanum pennellii | 1 | gene-LOC107031422 |
| Tamaricaceae | Reaumuria soongarica | 1 | STRG.2217_chr01_- |
| Tamaricaceae | Tamarix chinensis | 1 | TC01G0793 |
| Zosteraceae | Zostera marina | 1 | Zosma05g32300.v3.1 |