Basic Information
Locus ID:
evm.TU.utg000005l.218
Species & Taxonomic ID:
Kandelia candel & 61147
Genome Assembly:
GCA_037832225.1
Description:
Lysosomal
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| PERG.utg000005l | 4001082 | 4013142 | + | evm.TU.utg000005l.218 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.57 | 115,912.74 Da | 36.00 | 84.14 | -0.29 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd10810 | GH38N_AMII_LAM_like | 42 | 318 | 0.0 | - |
| Pfam | PF17677 | Glycosyl hydrolases family 38 C-terminal beta sandwich domain | 907 | 1014 | 1.6E-9 | IPR041147 |
| Pfam | PF09261 | Alpha mannosidase middle domain | 359 | 449 | 2.0E-18 | IPR015341 |
| Pfam | PF01074 | Glycosyl hydrolases family 38 N-terminal domain | 43 | 354 | 7.9E-97 | IPR000602 |
| Pfam | PF07748 | Glycosyl hydrolases family 38 C-terminal domain | 615 | 825 | 2.9E-44 | IPR011682 |
| SUPERFAMILY | SSF74650 | Galactose mutarotase-like | 463 | 1017 | 1.3E-141 | IPR011013 |
| SUPERFAMILY | SSF88688 | Families 57/38 glycoside transferase middle domain | 359 | 456 | 7.52E-27 | IPR028995 |
| SUPERFAMILY | SSF88713 | Glycoside hydrolase/deacetylase | 31 | 357 | 2.11E-112 | IPR011330 |
| Gene3D | G3DSA:3.20.110.10 | Glycoside hydrolase 38, N terminal domain | 42 | 322 | 3.5E-123 | IPR027291 |
| Gene3D | G3DSA:2.60.40.1180 | - | 479 | 608 | 2.5E-30 | IPR013780 |
| Gene3D | G3DSA:1.20.1270.50 | Glycoside hydrolase family 38, central domain | 323 | 400 | 1.9E-30 | IPR037094 |
| Gene3D | G3DSA:2.70.98.30 | - | 609 | 873 | 7.0E-93 | - |
| Gene3D | G3DSA:2.60.40.1360 | - | 893 | 1020 | 1.9E-34 | - |
| Gene3D | G3DSA:1.20.1270.50 | Glycoside hydrolase family 38, central domain | 401 | 457 | 1.0E-19 | IPR037094 |
| SMART | SM00872 | Alpha_mann_mid_2 | 359 | 433 | 3.7E-21 | IPR015341 |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G26720.1 | Glycosyl hydrolase family 38 protein. | 0 |
| RefSeq | XP_043812025.1 | alpha-mannosidase At3g26720 isoform X1 [Manihot esculenta] | 0 |
| P94078 | Alpha-mannosidase At3g26720 OS=Arabidopsis thaliana OX=3702 GN=At3g26720 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2P2MM01 | Alpha-mannosidase OS=Rhizophora mucronata OX=61149 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology