Basic Information
Locus ID:
evm.TU.utg000004l.275
Species & Taxonomic ID:
Kandelia candel & 61147
Genome Assembly:
GCA_037832225.1
Description:
PB1 domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| PERG.utg000004l | 2622702 | 2628543 | - | evm.TU.utg000004l.275 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.26 | 147,500.48 Da | 49.45 | 76.27 | -0.52 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd06410 | PB1_UP2 | 189 | 284 | 2.05305E-42 | - |
| CDD | cd13999 | STKc_MAP3K-like | 1054 | 1307 | 8.58859E-110 | - |
| Pfam | PF00564 | PB1 domain | 202 | 285 | 2.2E-19 | IPR000270 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 1049 | 1311 | 1.9E-61 | IPR001245 |
| SUPERFAMILY | SSF54277 | CAD & PB1 domains | 201 | 290 | 1.64E-20 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 1039 | 1311 | 1.01E-77 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 1041 | 1135 | 2.1E-25 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 204 | 285 | 9.0E-11 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 1136 | 1332 | 5.2E-54 | - |
| SMART | SM00220 | serkin_6 | 1048 | 1314 | 2.0E-60 | IPR000719 |
| SMART | SM00666 | PB1_new | 200 | 286 | 2.6E-30 | IPR000270 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1048 | 1314 | 41.375179 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 1054 | 1079 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 1173 | 1185 | - | IPR008271 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 1238 | 1260 | 1.1E-12 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 1130 | 1143 | 1.1E-12 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 1282 | 1304 | 1.1E-12 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 1167 | 1185 | 1.1E-12 | IPR001245 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 148 | 178 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G35050.1 | Protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain. | 0 |
| RefSeq | XP_011018312.1 | PREDICTED: uncharacterized protein LOC105121394 [Populus euphratica] | 0 |
| O64768 | RAF-like serine/threonine-protein kinase 24 OS=Arabidopsis thaliana OX=3702 GN=RAF24 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2P2M002 | Protein kinase domain-containing protein OS=Rhizophora mucronata OX=61149 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology